| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3702 |
|---|
| Symbol | |
|---|
| ID | 1185367 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 4174615 |
|---|
| End bp | 4176069 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637395049 |
|---|
| Product | phosphate transporter family protein |
|---|
| Protein accession | NP_793476 |
|---|
| Protein GI | 28870857 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0306] Phosphate/sulphate permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCACGG TGGTCACCAC TTGGACCCCG TTCGTGCTGT TGGGCGTGGC CTTGCTGATT
GCGCTGGCAT TTGAATTCGT CAACGGCTTT CATGACACCG CCAACGCCGT CGCAACGGTG
ATCTATACCC ACTCGCTGCC GCCTGGCTTT GCGGTGGTCT GGTCGGGCTT TTTCAACTTT
CTCGGCGTGA TGCTCTCCAG TGGTGCCGTG GCGTTCGGCA TCATCGCGTT GTTGCCGGTG
GAGCTGATCC TGCAGACTGG CTCGTCGGCA GGCTTCGCCA TGATTTTCGC GCTGCTGATC
GCGGCCATCA TCTGGAACCT CGGCACCTGG TGGCTGGGCC TGCCGGCCTC CTCTTCGCAC
ACCTTGATCG GCTCGATCAT CGGTGTCGGC ATTGCCAACG CATTGATGCA TGGGCGTGAC
GGCACCAGCG GCGTGGACTG GTCTCAGGCC ACCAAGATCG GTTACTCCTT ACTGCTCTCG
CCGCTGGTCG GCTTTGGCTG TGCCGCCCTG TTGTTGCTGG CGATGCGCAT GTTCATCAAG
AATCGCGCAC TGTACAAGGC ACCTGAAGGC AGCGCGCCGC CGCCCTTGTG GATTCGCGCC
ATGCTGATCG TGACCTGCAC CGGCGTGTCG TTCGCGCACG GCTCCAACGA TGGACAGAAA
GGCATGGGGC TGATCATGCT GATTCTGGTC GGCACCCTGC CGATGGCCTA CGCGCTAAAC
CGCACCATGC CGGCCGATCA GGCCACTCAG TTCGCTGCTG TGGCCGAAGT CACCCAGCAG
GCGCTGATTC GCAGTGTGCC GCAGCCCGCC CCAAGTGATT CGCGCCAGAC GCTGTCGGAT
TATCTGGTCA GCAGGCAGGC GGGCCCTGAC CTGATCCCGG CGCTGGCGGT GATGACCGGC
AAGATCGGCA ATCAGGTTGC CAGCTATGGG TCGCTGTCGA AGGTGCCTGC GGAAGCGGTG
ACCAACGTGC GAAACGACAT GTACCTGACC TCGGAAACCA TCCGCTTGAT GGATAAAAAC
AAGGTGGGCA ATTTCGACGC AGATACCCAG ACCAAGCTCG ATGCGTTCAA AGGGCAGATC
GACAGCGCGA CGCGTTTTAT TCCGACCTGG GTCAAGATTG TCGTGGCCAT CGCCCTGGGG
CTGGGCACGA TGGTCGGCTG GAAGCGTATC GTCGTGACCG TCGGCGAGCG GATCGGCAAG
ACGCACATGA CCTACGCCCA AGGGGCGTCG GCAGAGGTGG TGGCGATGTT CACCATTGGC
GCAGCGGACA TGTACGGGCT GCCGGTGTCG ACGACTCATG TGTTGTCGTC CGGTGTGGCA
GGTTCAATGG TCGCCAACGG CTCGGGACTG CAAATGCGCA CCCTGCGCAA CCTGGCCACC
GCCTGGGTGT TGACCCTGCC GGCAGCTATT TTGCTGTCAG GCTCGCTGTA CTGGGTGTTC
AGCAAACTGT TTTGA
|
|---|
| Protein sequence | MGTVVTTWTP FVLLGVALLI ALAFEFVNGF HDTANAVATV IYTHSLPPGF AVVWSGFFNF
LGVMLSSGAV AFGIIALLPV ELILQTGSSA GFAMIFALLI AAIIWNLGTW WLGLPASSSH
TLIGSIIGVG IANALMHGRD GTSGVDWSQA TKIGYSLLLS PLVGFGCAAL LLLAMRMFIK
NRALYKAPEG SAPPPLWIRA MLIVTCTGVS FAHGSNDGQK GMGLIMLILV GTLPMAYALN
RTMPADQATQ FAAVAEVTQQ ALIRSVPQPA PSDSRQTLSD YLVSRQAGPD LIPALAVMTG
KIGNQVASYG SLSKVPAEAV TNVRNDMYLT SETIRLMDKN KVGNFDADTQ TKLDAFKGQI
DSATRFIPTW VKIVVAIALG LGTMVGWKRI VVTVGERIGK THMTYAQGAS AEVVAMFTIG
AADMYGLPVS TTHVLSSGVA GSMVANGSGL QMRTLRNLAT AWVLTLPAAI LLSGSLYWVF
SKLF
|
|---|
| |