Gene PSPTO_3668 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3668 
Symbol 
ID1185333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4136051 
End bp4137046 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content61% 
IMG OID637395015 
Productallantoicase 
Protein accessionNP_793442 
Protein GI28870823 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG4266] Allantoicase 
TIGRFAM ID[TIGR02961] allantoicase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTTT ACGCCGCACC GTTCGAGAAG TTCGTCAACC TGGCCGACGC GCGCCTGGGG 
ACCAAAATCC TTTCGGTCAC CGATGACTGG TTCGCCGATG CCAACCGCCT GTTCCAGCCA
ACGCCTGCGG TCTGGAAAGA AGGCGTGTTC GATGACAACG GCAAGTGGAT GGACGGCTGG
GAGTCGCGGC GCAAGCGTTT CGAAGGCTAT GACAGCGCAG TGATTAAACT CGGCGTGGCA
GGCACCCTCA AGGGCGTGGA CATCGACACG TCGTTCTTCA CCGGCAACTT TCCGCCTTCC
GCTTCTCTGG AAGCCTGCTT TCTGGCCTCT GGCGAGCCGG ACGAAAACAC CGCGTGGACC
GAAGTGCTGT CGTCGGTGGA ACTCAAAGGC AACAGCCATC ACTACCACGA GATCAGCCAC
GACCAGGCGT TCAGCCATTT GCGCTTCAAT ATCTACCCGG ACGGCGGTGT GGCGCGCCTG
CGGGTGTACG GCGTACCACA TCGCGACTGG TCGAAAGTCA CTGAAAGCGA GCAGATTGAT
CTGGTCGCGG CACTCAATGG CGGCCGTTCG ATTGCCTGTT CGGACGAGCA TTACGGCAGC
ATGAGCAACA TCCTTAACCC CGGCCGCGGC GTGAACATGG GCGATGGCTG GGAAACCGCG
CGCCGTCGCA CACCGGGCAA TGACTGGGTC ATCGTCGCCT TGGGGCACAA GGGCGAAGTC
GAGAAAGTCA TCGTCGACAC GCTGCACTTC AAGGGCAACT ACCCGGACAG CTGCTCGATT
CAGGGCGCGT TCGTCAAAGG CGGCACTGAT AGCCAGATCG AAACCCAGAG CCTGTTCTGG
CGCGAGCTGC TGCCCAGCCA GAAGCTCACC ATGCACGCCG AACACGAGTT CGCCGAGCAG
GTAAAAGCCA TCGGCCCGAT CACCCACATC CGCCTGAACG TGTTCCCGGA CGGGGGTGTG
AGTCGCTTGC GGGTGTTGGG CAAGGTGTCC AGGTAA
 
Protein sequence
MKVYAAPFEK FVNLADARLG TKILSVTDDW FADANRLFQP TPAVWKEGVF DDNGKWMDGW 
ESRRKRFEGY DSAVIKLGVA GTLKGVDIDT SFFTGNFPPS ASLEACFLAS GEPDENTAWT
EVLSSVELKG NSHHYHEISH DQAFSHLRFN IYPDGGVARL RVYGVPHRDW SKVTESEQID
LVAALNGGRS IACSDEHYGS MSNILNPGRG VNMGDGWETA RRRTPGNDWV IVALGHKGEV
EKVIVDTLHF KGNYPDSCSI QGAFVKGGTD SQIETQSLFW RELLPSQKLT MHAEHEFAEQ
VKAIGPITHI RLNVFPDGGV SRLRVLGKVS R