Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3668 |
Symbol | |
ID | 1185333 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 4136051 |
End bp | 4137046 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637395015 |
Product | allantoicase |
Protein accession | NP_793442 |
Protein GI | 28870823 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG4266] Allantoicase |
TIGRFAM ID | [TIGR02961] allantoicase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTTT ACGCCGCACC GTTCGAGAAG TTCGTCAACC TGGCCGACGC GCGCCTGGGG ACCAAAATCC TTTCGGTCAC CGATGACTGG TTCGCCGATG CCAACCGCCT GTTCCAGCCA ACGCCTGCGG TCTGGAAAGA AGGCGTGTTC GATGACAACG GCAAGTGGAT GGACGGCTGG GAGTCGCGGC GCAAGCGTTT CGAAGGCTAT GACAGCGCAG TGATTAAACT CGGCGTGGCA GGCACCCTCA AGGGCGTGGA CATCGACACG TCGTTCTTCA CCGGCAACTT TCCGCCTTCC GCTTCTCTGG AAGCCTGCTT TCTGGCCTCT GGCGAGCCGG ACGAAAACAC CGCGTGGACC GAAGTGCTGT CGTCGGTGGA ACTCAAAGGC AACAGCCATC ACTACCACGA GATCAGCCAC GACCAGGCGT TCAGCCATTT GCGCTTCAAT ATCTACCCGG ACGGCGGTGT GGCGCGCCTG CGGGTGTACG GCGTACCACA TCGCGACTGG TCGAAAGTCA CTGAAAGCGA GCAGATTGAT CTGGTCGCGG CACTCAATGG CGGCCGTTCG ATTGCCTGTT CGGACGAGCA TTACGGCAGC ATGAGCAACA TCCTTAACCC CGGCCGCGGC GTGAACATGG GCGATGGCTG GGAAACCGCG CGCCGTCGCA CACCGGGCAA TGACTGGGTC ATCGTCGCCT TGGGGCACAA GGGCGAAGTC GAGAAAGTCA TCGTCGACAC GCTGCACTTC AAGGGCAACT ACCCGGACAG CTGCTCGATT CAGGGCGCGT TCGTCAAAGG CGGCACTGAT AGCCAGATCG AAACCCAGAG CCTGTTCTGG CGCGAGCTGC TGCCCAGCCA GAAGCTCACC ATGCACGCCG AACACGAGTT CGCCGAGCAG GTAAAAGCCA TCGGCCCGAT CACCCACATC CGCCTGAACG TGTTCCCGGA CGGGGGTGTG AGTCGCTTGC GGGTGTTGGG CAAGGTGTCC AGGTAA
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Protein sequence | MKVYAAPFEK FVNLADARLG TKILSVTDDW FADANRLFQP TPAVWKEGVF DDNGKWMDGW ESRRKRFEGY DSAVIKLGVA GTLKGVDIDT SFFTGNFPPS ASLEACFLAS GEPDENTAWT EVLSSVELKG NSHHYHEISH DQAFSHLRFN IYPDGGVARL RVYGVPHRDW SKVTESEQID LVAALNGGRS IACSDEHYGS MSNILNPGRG VNMGDGWETA RRRTPGNDWV IVALGHKGEV EKVIVDTLHF KGNYPDSCSI QGAFVKGGTD SQIETQSLFW RELLPSQKLT MHAEHEFAEQ VKAIGPITHI RLNVFPDGGV SRLRVLGKVS R
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