Gene PSPTO_3626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3626 
Symbol 
ID1185291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4087984 
End bp4088391 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content65% 
IMG OID637394976 
Productlipoprotein, putative 
Protein accessionNP_793403 
Protein GI28870784 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACCGTA CCGCACGCAT CACCTTGTTG GGTCTGGTCG TTGGCCTGAG TGCCTGTGCA 
GTCCAGTATC CGGCACCGCC ACATAGCCAG GATCCGATTA TTAACCTGCC GGGTGGCCAG
CAGCCTGGCG CACCGCGCCC TGGCACTGCG CCTGCCGAGC CTGCCAAAGC GCCAGCGGCA
GCACCGAAGA CCTCGGCCAG CTTCGCCCCG CCACCGGGCG GTGGCAGCCA TTGGGACCCT
CGCCTGGGTG TGTACGTGAT GGACGACCAG CCCAATACGT TCTATCGCCA GCGCACTTAC
TACCAATGGA ACAACGGCTG GAGCTGGGCG ACCAACCCCA ACGGACCGTG GCAGGCGACC
GACGCCAGCG GCGTACCGGC CGGGCTGGGT AAACAGTTCA GCAATTGA
 
Protein sequence
MYRTARITLL GLVVGLSACA VQYPAPPHSQ DPIINLPGGQ QPGAPRPGTA PAEPAKAPAA 
APKTSASFAP PPGGGSHWDP RLGVYVMDDQ PNTFYRQRTY YQWNNGWSWA TNPNGPWQAT
DASGVPAGLG KQFSN