| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3625 |
|---|
| Symbol | |
|---|
| ID | 1185290 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 4086925 |
|---|
| End bp | 4087923 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637394975 |
|---|
| Product | sulfate ABC transporter, periplasmic sulfate-binding protein |
|---|
| Protein accession | NP_793402 |
|---|
| Protein GI | 28870783 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1613] ABC-type sulfate transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR00971] sulfate/thiosulfate-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.929699 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAACAAAC TCTTCGCCGC CTCGCTACTG GCCGCAGGCC TGGCCTTTGC CAGCGCAACT
CAGGCGGCTC AGCCGCTGCT CAACGTCTCT TACGACGTGA TGCGTGATTT CTACAAGGAC
TACAACAGCG CCTTTCAGAA ACACTGGAAA GCCGAAAAGA ATGAAGACGT GACCGTGCAG
ATGTCGTTTG GCGGGTCGAG CAAGCAGGCG CGCTCGGTCA TCGACGGGCT GCCGGCTGAT
GTGATCACCA TGAACATGGC CACCGACATC AATGCGCTGG CCGACAATGG TGAACTGGTG
CCGAAAGACT GGGTCAGCCG CCTGCCGAAC AACAGTGCAC CGTTCACGTC GGCCACTGTG
TTTATCGTGC GCAAGGGCAA CCCGAAAGCC CTCAAAGACT GGCCGGACCT GATCAAGGAT
GGCGTCGAAG TCATCGTGCC CAACCCGAAA ACCTCGGGCA ACGGCCGCTA CACCTACCTG
TCGGCGTGGG GGTACACCCT GAAAAACGGC GGCGATGAAG CCGCTGCGAA GAAATTCGTC
GGTGATCTGT TCCGCCATGT GCCAGTGCTC GACACCGGCG GCCGTGGTGC GACCACGACG
TTCATGACCA ACCAGATCGG CGACGTGCTG GTCACCTTTG AAAACGAAGC CGAGATGATC
GCCCGCGAAT TCGGTCGCGA CCAGTTTGAA GTGGTCTACC CGTCCGTGTC GGCAGAAGCC
GAGCCGCCGG TGAGTGTGGT CGACAAGGTG GTGGACAAGA AACAGTCTCG CCCACTGGCT
GAGGAATATC TGAAATACCT GTGGTCGCCA GAAGGTCAGG AAATCGCTGC CAAGAATTAC
CTGCGCCCAC GCGATACGCA GATTCTCGCC AAGTACAAGG ATCGTTTCCC GAAAGTGGAC
TTCCTCTCGG TGGAGAAAAC CTTCGGCGAC TGGCGCACTG TGCAGAAGAC CCACTTCATT
GACGGCGGTG TGTTCGACCA GATTTATCCG GGCAAGTAA
|
|---|
| Protein sequence | MNKLFAASLL AAGLAFASAT QAAQPLLNVS YDVMRDFYKD YNSAFQKHWK AEKNEDVTVQ
MSFGGSSKQA RSVIDGLPAD VITMNMATDI NALADNGELV PKDWVSRLPN NSAPFTSATV
FIVRKGNPKA LKDWPDLIKD GVEVIVPNPK TSGNGRYTYL SAWGYTLKNG GDEAAAKKFV
GDLFRHVPVL DTGGRGATTT FMTNQIGDVL VTFENEAEMI AREFGRDQFE VVYPSVSAEA
EPPVSVVDKV VDKKQSRPLA EEYLKYLWSP EGQEIAAKNY LRPRDTQILA KYKDRFPKVD
FLSVEKTFGD WRTVQKTHFI DGGVFDQIYP GK
|
|---|
| |