| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3624 |
|---|
| Symbol | |
|---|
| ID | 1185289 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 4085993 |
|---|
| End bp | 4086826 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637394974 |
|---|
| Product | ion transport protein, putative |
|---|
| Protein accession | NP_793401 |
|---|
| Protein GI | 28870782 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1226] Kef-type K+ transport systems, predicted NAD-binding component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACACCT CTCTGAGCCG TCGCGAGCGG TTGCATATCG TTATTTTCGA GGCCAATACG
CCTGCCGGGC GGATGTTTGA CAAGATTGTG CTGGTGGCGA TCCTGCTCAG TCTGCTGGTC
ACGGTCATCG ACAGCATCGA AAGCATTCAT CGCGATTACG CGACGCTGTT CGCCTGGATC
GAATGGGGCT TCACGCTGCT GTTCGCCATT GAATACATCA TGCGTCTGTA CTGCTCGCCC
CGGCCACTGA AATATGCGTT CAGTTTTTAC GGGCTGGTCG ATTTGCTGGC GATTGTGCCG
GGGGTTCTGT CGATTTATTA CAGCGACGCA CAATACCTGC TGATCGTGCG GATCATCCGT
ATGCTGCGGA TTTTCCGGGT GCTCAAGCTC GGTACTTACC TGCGCCAGGC CAACTACCTG
CTGGCAGCGC TACGCGGCAG CAAGCAGAAG ATCATCGTGT TTCTGGTCAC CGTCTCAACC
CTGGTCACGG TGTTCGGCAC GCTGATGTAC GTGATCGAAG GCCCGGAGCA CGGTTTCACC
AGCATCCCCA AGGGCATTTA CTGGGCTATC GTGACCCTCA CCACCGTCGG CTTCGGCGAT
ATCGTGCCCA AGACCCCCGT CGGGCAGATG CTCTCGTCGC TTGTGATGAT CATCGGTTAC
TCGATCATCG CCGTGCCCAC CGGGATATTC ACCGCCGAGC TGGCCAACGC CATGCGCGGC
GAGCAGTTGA AACACGATTG CCCGGTGTGC TCGAAGAATT TCCACGAGCA TGGCGCAGCG
TTCTGTTCGC GATGTGGTAA TCAATTGTTC GCAAAAGTAG AGCACAAGGC ATAA
|
|---|
| Protein sequence | MDTSLSRRER LHIVIFEANT PAGRMFDKIV LVAILLSLLV TVIDSIESIH RDYATLFAWI
EWGFTLLFAI EYIMRLYCSP RPLKYAFSFY GLVDLLAIVP GVLSIYYSDA QYLLIVRIIR
MLRIFRVLKL GTYLRQANYL LAALRGSKQK IIVFLVTVST LVTVFGTLMY VIEGPEHGFT
SIPKGIYWAI VTLTTVGFGD IVPKTPVGQM LSSLVMIIGY SIIAVPTGIF TAELANAMRG
EQLKHDCPVC SKNFHEHGAA FCSRCGNQLF AKVEHKA
|
|---|
| |