Gene PSPTO_3618 details

Gene Information

• Locus tag: PSPTO_3618
• ID: 1185283
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 4080432
• End bp: 4082498
• Gene Length: 2067 bp
• Protein Length: 688 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637394968
• Product: hypothetical protein
• Protein accession: NP_793395
• Protein GI: 28870776
• COG category: [S] Function unknown
• COG ID: [COG1289] Predicted membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.94953
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCCACCCG CGCGCGACTG GTTCTACGGT GTGCGTACCT TCGGCGCTTC CATGCTGGCG 
CTTTACATCG CGCTGTTGAT GGAAATGCCC CGCCCCTACT GGGCAATGGC CACCGTGTAC 
ATCGTTTCCA GCCCGTTCGT AGGCCCGACC AGCTCCAAAG CGTTGTATCG CGCCGCCGGA 
ACCCTGGCCG GTGCGGCCGC GTCGGTGCTG CTGGTGCCGA TGTTCGTGCA GACGCCCTTG 
CTGTTGGCCA TCGTGGTCGG GCTGTGGACC GGCACGCTGC TGTTTCTGTC TCTGCACCTG 
CGCACGGCCA ACAGTTACGC GTTGATGCTG GCGGGCTACA CCATGCCGTT GATTTCGCTG 
CCGGTGGTCG ATAATCCACA GGCCGTGTTC GACATTGCAG TGTCGCGTAC CGAGGAAATT 
TTCCTTGGCA TCATCTGCGC CTCCGTTGTC GGCGCGATGT TCTGGCCCAG ACGTCTGGCT 
CCGGTGTTTC AGGCCACCAC AGAAAAGTGG TTCGGTGACG CCGCGACCTA CAGCCAGCGC 
TTCATCAGCC GCACCTGTCA GGCCGAAGAA ATCGGCACGC TGCGTAATTC CATGGTCGGC 
AGCTTCAATT CGCTGGAAAT GATGATCGGC CAGTTGAGCC ACGAGGGCGC ACGCAAACAG 
ACCGTGCGCA ACGCCAATGA ACTACGCGGC CGAATGATTC ACCTGCTGCC GGTCATTGAT 
GCGCTGGACG ATGCGTTGTG GGCACTGGAG CGGCGCACGC CCGAGCTGCT GGCCAGCCTG 
AAACCCATGC TGCAAAGGGC TTGCGACTGG CTCGAAAGCA CCGCCGATGG TCCGCAACAT 
GAGCCGTGGC GACAACTGCA CCGCGAGCTG GAAGGCCTGC AACCGGGCTC TGCGCAACTC 
GATGACCGAG ACCGGTTATT GCTCTCCAAT ACCCTGTTCC GCCTGAGCGA GTGGATCGAC 
CTGTGGCAGG ATTGCCGCAC GCTGCAGTAC GCGATCAAGA CCGACGATCA GTCGCCATGG 
CGCGCCGTCT ATCGCCACTG GCGTCTGGGT CGCCTGACAC CGTTTCTGGA CCGCGGCCTG 
ATGCTCTATT CAGTGACTTC GACGGTACTG GCGATCATCG CCGCATCGGT GTTGTGGATT 
CTGCTGGGCT GGAAAGACGG CGCCAGTGCG GTCGCGCTGG CCGCGGTGTC GTGCAGCTTC 
TTTGCCGCCA TGGACGACCC GGCCCCGCAA ATCTACCGGT TCTTCTTCTG GACCCTGCTG 
TCGGTGGTGT TTGCCAGCCT GTACCTGTTC GTGGTGCTGC CCAACCTGCA TGACTTCCCG 
ATGCTGGTAC TCGCCTTCGC CGTACCGTTT ATCTGCGTCG GCACCTTGAC CGTACAGCCG 
CGCTTCTTTC TGGGCACGCT GCTGACCATC GTCAATACCT CGTCGTTCAT CAGCATCCAG 
AGCGCCTACG ACGCGGATTT CATGAACTTC CTCAATTCCA ATCTGGCCGG GCCTGCCGGG 
CTGCTGTTCG CCTTTATCTG GACGCTGGTG TTCCGCCCGT TTGGCGTCGA TCTGGCGGTG 
AAGCGCCTGA CCCGTTTCAG CTGGCGCGAC ATCGCCAGCC TCAGCGAACA CTCGTCTCTG 
GCCGAGCACC GGCGCATGGG CGTGCAAATG CTCGACCGCC TGATGCAGCA ACTGCCGCGC 
CTGACGATTA CCGCGCAGGA CACCGGGATT GCTCTGCGTG AGCTGCGGGT GGCGCTGAAC 
ATGCTTGACC TGCTCGCTTA CACCCGGCGC GCAACACCTG CCGCTCAGGT GTTATTGCGG 
CAGGTGATCG ATGAGGTCAG CGGCTATTTC AAACACTGCA GCAAAGCCGG CGAGCGACTG 
CCCGCGCCCA GAGGCCTGTT GATGGCCATG GACCGCGCAC GCCGCGCGCT GACCGATCAG 
GAAATGGGCG ACAACCCGGC TCGCGTTCAT CTGCTGCACG CGCTCAGCGG CCTGCGTCTG 
GCGCTATTGC CGGGCGTGGA GATCGTCACT GTGGGGGGTG AGCTGACCGA GCAACTGCCA 
CACAACATCG ATGGAGCGCC GCTGTGA 

 

Protein sequence

MPPARDWFYG VRTFGASMLA LYIALLMEMP RPYWAMATVY IVSSPFVGPT SSKALYRAAG 
TLAGAAASVL LVPMFVQTPL LLAIVVGLWT GTLLFLSLHL RTANSYALML AGYTMPLISL 
PVVDNPQAVF DIAVSRTEEI FLGIICASVV GAMFWPRRLA PVFQATTEKW FGDAATYSQR 
FISRTCQAEE IGTLRNSMVG SFNSLEMMIG QLSHEGARKQ TVRNANELRG RMIHLLPVID 
ALDDALWALE RRTPELLASL KPMLQRACDW LESTADGPQH EPWRQLHREL EGLQPGSAQL 
DDRDRLLLSN TLFRLSEWID LWQDCRTLQY AIKTDDQSPW RAVYRHWRLG RLTPFLDRGL 
MLYSVTSTVL AIIAASVLWI LLGWKDGASA VALAAVSCSF FAAMDDPAPQ IYRFFFWTLL 
SVVFASLYLF VVLPNLHDFP MLVLAFAVPF ICVGTLTVQP RFFLGTLLTI VNTSSFISIQ 
SAYDADFMNF LNSNLAGPAG LLFAFIWTLV FRPFGVDLAV KRLTRFSWRD IASLSEHSSL 
AEHRRMGVQM LDRLMQQLPR LTITAQDTGI ALRELRVALN MLDLLAYTRR ATPAAQVLLR 
QVIDEVSGYF KHCSKAGERL PAPRGLLMAM DRARRALTDQ EMGDNPARVH LLHALSGLRL 
ALLPGVEIVT VGGELTEQLP HNIDGAPL