| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3591 |
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| Symbol | rarD-2 |
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| ID | 1185256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4050049 |
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| End bp | 4050972 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637394943 |
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| Product | rarD protein |
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| Protein accession | NP_793370 |
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| Protein GI | 28870751 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2962] Predicted permeases |
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| TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTCCATA CCGGGGCAGA CTCGATTCAA GAGGCGGTTG TGTACAAAGG TGTCGTGCTG
TCGGTTCTGG CTTCCGTGCT GTTCGGGGTC ATGTATTTCT ATACCTCGCT GATGAAGCCT
CTCGACGGCG AAGAGATTTT CGGCTGGCGC ATGCTGCTGA CGGTGCCGTG CGCCACGCTG
TTCATGCTGG TCAGCGGTGA CTGGCGGCGA GTCCGCGACC TGGCCGCGCG GCTCTGGCAG
CGACCGCTGC TGATCTTCGG GCTGCTGCTG TCATCGATGT TGCTCGGCGC GCAACTGTTG
ATTTTCATGT GGGCGCCGCT GCACGGGCGC AGCCTGGAAG TATCGCTGGG TTATTTCCTG
CTGCCGCTGA GCATGATCTT CACCGGCCGG GTGGTATACG GCGAGCACCT GTCGTACCTG
CAAAAGGTTG CTGCGGCGTT TGCCATGATC GGCGTCGGTC ATGAACTGTG GCGGCTGGGC
AGCTTTTCCT GGGAAACCCT GTTGGTTGCA GGCGGCTATC CGCTCTATTT CGTGCTGCGC
CGTAAACTCA AGACCGATCA CCTGGGCGGC CTGTGGTTTG ACATGCTGCT GATGCTGCCC
ATCGGCTTGT GGTTCATCAG CAACGGCCAC CCGCACGCCA TTCAGCAGGC ACCGCTGCTG
TACCTGCTGA TTCCGCTGCT CGGGGTGATC AGCGCCTCGG CGCTGGTCAG TTACATCGTC
GCCAGCCGCT TGCTGCCGTT CAGCCTGTTC GGGTTGCTCA GTTACGTCGA GCCGATCCTG
CTGGTGGGCG TTGCCCTGCT GCTGGGCGAA AGCATCGGTC GTGATGAATG GCTGACTTAC
CTGCCGATCT GGCTGGCGGT CGTGGTGCTG ATGATCGAAG GCGCCAAACA CATGCTGGTC
CAGCGCCGCC GGGATGCGGC GTGA
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| Protein sequence | MLHTGADSIQ EAVVYKGVVL SVLASVLFGV MYFYTSLMKP LDGEEIFGWR MLLTVPCATL
FMLVSGDWRR VRDLAARLWQ RPLLIFGLLL SSMLLGAQLL IFMWAPLHGR SLEVSLGYFL
LPLSMIFTGR VVYGEHLSYL QKVAAAFAMI GVGHELWRLG SFSWETLLVA GGYPLYFVLR
RKLKTDHLGG LWFDMLLMLP IGLWFISNGH PHAIQQAPLL YLLIPLLGVI SASALVSYIV
ASRLLPFSLF GLLSYVEPIL LVGVALLLGE SIGRDEWLTY LPIWLAVVVL MIEGAKHMLV
QRRRDAA
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