| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3547 |
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| Symbol | |
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| ID | 1185212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4002957 |
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| End bp | 4003892 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637394900 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | NP_793327 |
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| Protein GI | 28870708 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.570181 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCAACA GTAATGCCCT GAGAAAGCTG GACATGCAGG ACCTGATGGT CTTTGTCTCG
GTGTATGAGC AGCGCAACCT GACGCTGGTT GCGCAGGCGC TGCATGTCAG CCAGTCGACG
GTCAGTTACT GCCTGAAAAA GCTGCGTGCC AATTTCGAAG ATGACCTGTT CATCTGCACC
CGCAACGGCA TGCGCCCGAC CCGCAAGGCG CTGGCGATGC ATGACCACGT GCAGCAGATT
CTGCAGCGGG TCAATCTGTG TCATGACGGC CTGAACCTGT TTGACCCGAC CCGCAGGCAC
ACCACGTTCA CCGTCTGCGC TCCCGAGTAT TTCGAACTGC TGGTATTGCC GCATTTGCTG
CGTGACTTTG CGACTGCCGG TTTTTCGGTC ACGGTCAATG TGCAAAAACT GGACAAACAA
CTGCCAGCCG AGCCGCTGAG CGATGGTCGT ATCGACCTGG CTCTGTGTTT TGGCCCGGGA
TTTCATCGCC TGCCAGACAG CCTTGTTTCG CAGGTATTGC TTGAAGATGA CCTAGTCTGT
GTCATGGACA CGCGATCTGC GCCGCTGAGC GCATTGATCG ACACGCAGAC GTTCACCCAG
CGGCGCCACG TGTACCCGAC ACCGTGGACA TCCGACACCA ATATCGTCGA TGGCTGGTTG
CATGAGCAGG GGCTGTCGCG GGACATCGTC GTGCGTGCCA ACAGCTACCG TGCGGCGCTG
CAATTGCTGG AAGGCACGGA CTTTATCCTG GTGCTGCCAC GGCGCATCCA GACCCTGCTG
GGCAACGAGC CGTGGATATC CGTTTTCGAA CTACCGCCCG ACCTGCCGGG TTTCAGCCTG
GACATGCTCT GGAGCGAAAA CGCTGATCAG GCCGAGGCCA GTGGCTGGCT GCGTGAGCAG
ATCGTGAAGG TGTGCGCCGA GCGCGGGTTG CTTTGA
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| Protein sequence | MLNSNALRKL DMQDLMVFVS VYEQRNLTLV AQALHVSQST VSYCLKKLRA NFEDDLFICT
RNGMRPTRKA LAMHDHVQQI LQRVNLCHDG LNLFDPTRRH TTFTVCAPEY FELLVLPHLL
RDFATAGFSV TVNVQKLDKQ LPAEPLSDGR IDLALCFGPG FHRLPDSLVS QVLLEDDLVC
VMDTRSAPLS ALIDTQTFTQ RRHVYPTPWT SDTNIVDGWL HEQGLSRDIV VRANSYRAAL
QLLEGTDFIL VLPRRIQTLL GNEPWISVFE LPPDLPGFSL DMLWSENADQ AEASGWLREQ
IVKVCAERGL L
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