| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3533 |
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| Symbol | |
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| ID | 1185198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3988256 |
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| End bp | 3989434 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637394886 |
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| Product | glycosyl transferase, group 1 family protein PslF |
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| Protein accession | NP_793313 |
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| Protein GI | 28870694 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0609585 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCATTG CCCTGCTTGC GCCACTGCCT CCCGAGCAGA ACGGCATCGC CGACTACGCC
GGGCATCTGC GTCAGGCGCT CGAAGGCCTC GGCCTGCAAG TCAGCACGCC GCTGCAGGGG
ATCGGTAACG ATCCTGGTGC CGCACAGCAG CGTGTTGCCG ACACGGACTG GAGCGAAATC
GATCTGGTTC ATGCCGAACT GGGCGGCGGG CGGCTGGCCG AATTTCAGGC CCTTCGCGCC
CTGCGCAAGC GGTTCCCGAA CCTGCCACTG ACGGCCACCG TGCACGACCC GGAGCGGCTG
GTGTGGCGGC GCGAGAAACT ACCCTGGCCG CTGTCGATAG CGGCCGGCAT GCGTTCGCCC
TTGCCGGAGA TCGCCACGGT GCTGGCCGAC CCGCTGTGCC TGCATGAGGA GCGGCAACTG
GCGCGGCACA TGACCCGCCT TGTAACGCTG ACTCAGGCTG GCAGCCTGAG CCTGCGCCAG
CGCATGGGGC TCGACGCCAC GCAGATGGTG GTGATCAATC ATGGCAACGT GGCCATCGAG
CCTGTGCCGC TGCCGCCCTT GAAGCCCTTG CGCCTGCTGT ATTTCGGTTT TATCTATCGC
GGCAAGGGCA TCGAGGACCT GCTCGATGCG CTGGCCAATG TGTTCACCGC TCAGCCGCAA
TTACGCTCCG CCGTACGCCT GACCCTGGCC GGCGGCAGCG CGCCGGAAAT GGCCTTCGGC
CCGTCGGGCA GCTATCTGGA GCAGTTGCGC CTGCACATTC GTCAATTGGG GCTGGTCGAC
CTGATCGACT GGCAACTGGA CCTGCCTGCC GAACAAATCC CGCAGGTCAT TCAGGCCCAT
CATGTGATGG TCCTGCCTTA TCGCGAGTCG AGCAAACTGA AGATTCTTGG CAAACTGCGC
GGTACCAGCG GCGCACTGTC GTGGGCAGTG GCCTGTGGCA GGGGCGTGAT TACCTCCGAT
GCGCGATCAT TTGCCGAGGA AGTCTCGCAC GGCAACGGCA TGATCTACCC GCAGGGCGAT
GTAGCGGGGC TAACCAGCGC GCTGGCACGT GTTTGCGCAA CACCGGGGCT GGTCGAACAA
TGGGCCGCAA ACGCCGCGCA CATGGGCAAG GCCAGGGTCT GGAGTCGCAC TGCCGAACAT
TTCCGGGATG TCTTCCGCCA AGCCTGCGAG GAAAAATGA
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| Protein sequence | MRIALLAPLP PEQNGIADYA GHLRQALEGL GLQVSTPLQG IGNDPGAAQQ RVADTDWSEI
DLVHAELGGG RLAEFQALRA LRKRFPNLPL TATVHDPERL VWRREKLPWP LSIAAGMRSP
LPEIATVLAD PLCLHEERQL ARHMTRLVTL TQAGSLSLRQ RMGLDATQMV VINHGNVAIE
PVPLPPLKPL RLLYFGFIYR GKGIEDLLDA LANVFTAQPQ LRSAVRLTLA GGSAPEMAFG
PSGSYLEQLR LHIRQLGLVD LIDWQLDLPA EQIPQVIQAH HVMVLPYRES SKLKILGKLR
GTSGALSWAV ACGRGVITSD ARSFAEEVSH GNGMIYPQGD VAGLTSALAR VCATPGLVEQ
WAANAAHMGK ARVWSRTAEH FRDVFRQACE EK
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