| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3531 |
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| Symbol | |
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| ID | 1185196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3985471 |
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| End bp | 3986247 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637394884 |
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| Product | lipoprotein PslD |
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| Protein accession | NP_793311 |
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| Protein GI | 28870692 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.717769 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAGCA TGATGCTGAT CGCCAGCTTA TTGCTGTTGA GTGCGTGCAA CACACCTTCC
AGGGTGGGTT TGCCCGACGA CCGTGCACAG ATAGAGGCCG GCCAGGCGGC CGGCCGTGCG
CTTGCCGGCA AACCACTGCC GCCGGAGAGG ATTCGTCCCG GCGACACCTT GCGAATCGTG
CGCAACAGCG GCGAGGCACC GTCGATTTCG GCGTTCACGG CCAACTCTAT CTATGAACTG
ACCCTGTTTC AGGTGCTCAA CGACGGCACT TTTTCCTACC CGTATATCGG CACCGTCAAG
GCTGCCGGCC TGACATTGCA ACAGCTCAAT GATTTGCTGG AAAGCAAGTT GCAGAACGTC
TACCGCGAGA CTGCCCTGAC CATCAATATT TCCCAGTCGC CAGGCAATAC CGTGTTTGTC
GGCGGCGCGG TGCGCAATTC GGTCACGCTG CCGATCAACG TGGCCACCAA CCTCAATCAA
GCGATTCTCG GCGCAGGCGG CGTGGCGCTG GACGCCGACG CTGGCCAGGT CGCACTGCTG
CGTCAGGAAG AAAACGGGCT CTACAAGACC TACTTTTTCG ACTACAGCAA GTTTCTCTGG
GCGGATGCCG GTGGCATGTC CGCGCCGGTG CTGTTGAAAC GCGGCGATAT CGTGTTCGTT
CCCAAATCCA CGGTCGGCAA CAAAGTTGAC GGCGTATCCC TGTATTTCAA CCAGCTGATT
CCCTTTGCGA AGTCGATCGG CCTGGGCCTG AACTACGAGT TGCGCAGTAC CAATTAA
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| Protein sequence | MKSMMLIASL LLLSACNTPS RVGLPDDRAQ IEAGQAAGRA LAGKPLPPER IRPGDTLRIV
RNSGEAPSIS AFTANSIYEL TLFQVLNDGT FSYPYIGTVK AAGLTLQQLN DLLESKLQNV
YRETALTINI SQSPGNTVFV GGAVRNSVTL PINVATNLNQ AILGAGGVAL DADAGQVALL
RQEENGLYKT YFFDYSKFLW ADAGGMSAPV LLKRGDIVFV PKSTVGNKVD GVSLYFNQLI
PFAKSIGLGL NYELRSTN
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