| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3473 |
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| Symbol | |
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| ID | 1185138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3921199 |
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| End bp | 3922875 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637394826 |
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| Product | monovalent cation/proton antiporter, MnhD/PhaD subunit |
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| Protein accession | NP_793253 |
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| Protein GI | 28870634 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCAAC TGATCATCGC GCCGATTCTG CTGCCGCTGC TGACTGCCGG GCTGATGCTC
TGGCTGGGCG AAAAGCATCG ACCGCTCAAG GGCCGCATCA ACCTGTTCTC CAGCATGCTC
GGGCTGGGCA TATCCGTGGC GCTGCTTGTC TGGGTGCAGC AGACCGGCAG CAGCGGCTCG
ATCGGCGTCT ACCTGCCGGG CAACTGGGGC GTGCCGTTCG GCATCGTGCT GGTGGTGGAT
CATCTGTCGG CACTGATGAT GGTACTGACC GGGATTGTCG GGGTCTGCGC CCTGCTGTTC
GCGCTGGCTC GCTGGGATAG GGCCGGCGCG AGTTTTCACG CACTGTTCCA GATTCAGCTG
ATGGGCCTGT ACGGCGCGTT CCTGACCGCC GACCTGTTCA ACCTGTTCGT GTTCTTCGAG
GTCCTGCTGG CCGCCTCCTA CGGCCTGATG TTGCACGGCT CGGGCCGGGC GCGAGTGTCG
ACAGGCCTGC ATTATATTTC GATCAACCTG CTGGCGTCCT CGCTGTTTCT GATCGGTGCT
GCGCTGATCT ACGGGGTGAC CGGCACGCTC AACTTCGCCG ATCTGGCGAT CAAGATTCCC
CAGGTGGCAG AGTCCGACCT GGGGCTGCTG CACGCAGGCG CTGCCATTCT GGCCACGGCG
TTTCTGGCCA AGGCCGGCAT GTGGCCACTG AACTTCTGGC TGGTTCCGGC CTACTCGGCA
GCCAGTGCAC CGGTCGCGGC CATGTTCGCG ATCATGACCA AAGTCGGCGT CTACACCCTG
TTGCGCCTGT GGACACTGCT GTTTTCCGGT CAGGCTGGAG CCTCGGCATT CTTTGGCGGC
GACTGGCTCA TCTACGGCGG CATGGCGACG ATTTTTACCG CCGCAATAGC CATCATCGCC
GCCCAGCGCC TGGAACGCCT CGCCAGTCTG AGCATCCTGG TGTCGGCGGG CATTCTGCTG
TCGGCCATCG GTTTCGCCCA GCCGAGCCTG ACATCGGGCG CGCTGTTCTA TATGGTCAGC
TCGACCCTGG CGCTGAGCGC GATGTTTCTG CTCGGTGAAT TGATCGAACG TTCCCGCTCC
GCCAACGAGA TCCCGTTGGA GGACGACGTA GATCAACTGC CGCGCGTAAT GGAATCACTG
CATCCGCCGC CCGGCACCAA CCTGGACGAC GAGCAGAAAG TCGTGGTAGG CCAGGTCATC
CCCATGACCG TGGCCTTTCT GGGGCTGAGT TTTATCGCCT GCGCCCTGCT GATCATCGGC
ATGCCGCCAT TGTCGGGGTT CATTGGCAAG CTCACCCTGC TCAGCGCCCT GATGAACCCG
CTGGGGCTGG ATGTCGCGCA GGATGAAGCG CTTTCTACCC AGGCCTGGAT GCTCATCAGT
CTGCTGATCT TCTCCGGGCT GGCGTCGCTG ATTGCCTTTT CCAGGCTCGG CACTCAGCGT
TTCTGGACAC CTCACGAGCG TCCTTCGCCG TTGTTGCGAC GCAACGAATG CCTGCCGATC
ATCATTCTGC TGGGCCTGTG TATCGCACTG ACGTTCAAGG CCGAACCGCT GTTGCGCTAC
ACACAGGACA CCGCCGCCGC ACTGCACGAG CCCAAGCAGT ATGTGCAATC AGTGCTCGCC
ACACGCCCGA TACCCGGCCC TACCAGCCAG GACGTGAACC CGGAGGGACG ACCATGA
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| Protein sequence | MNQLIIAPIL LPLLTAGLML WLGEKHRPLK GRINLFSSML GLGISVALLV WVQQTGSSGS
IGVYLPGNWG VPFGIVLVVD HLSALMMVLT GIVGVCALLF ALARWDRAGA SFHALFQIQL
MGLYGAFLTA DLFNLFVFFE VLLAASYGLM LHGSGRARVS TGLHYISINL LASSLFLIGA
ALIYGVTGTL NFADLAIKIP QVAESDLGLL HAGAAILATA FLAKAGMWPL NFWLVPAYSA
ASAPVAAMFA IMTKVGVYTL LRLWTLLFSG QAGASAFFGG DWLIYGGMAT IFTAAIAIIA
AQRLERLASL SILVSAGILL SAIGFAQPSL TSGALFYMVS STLALSAMFL LGELIERSRS
ANEIPLEDDV DQLPRVMESL HPPPGTNLDD EQKVVVGQVI PMTVAFLGLS FIACALLIIG
MPPLSGFIGK LTLLSALMNP LGLDVAQDEA LSTQAWMLIS LLIFSGLASL IAFSRLGTQR
FWTPHERPSP LLRRNECLPI IILLGLCIAL TFKAEPLLRY TQDTAAALHE PKQYVQSVLA
TRPIPGPTSQ DVNPEGRP
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