| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3393 |
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| Symbol | |
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| ID | 1185053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3833793 |
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| End bp | 3836543 |
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| Gene Length | 2751 bp |
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| Protein Length | 916 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637394744 |
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| Product | tail tape measure protein |
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| Protein accession | NP_793176 |
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| Protein GI | 28870557 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3941] Mu-like prophage protein |
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| TIGRFAM ID | [TIGR01760] phage tail tape measure protein, TP901 family, core region |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAACA ATCTGGCATT AGGGCTGGTG ATTGGCGGCT CTGTCAGTTC CACCCTGGGT
TCCGCCTTCA GTACCGTCGA AGGCCGTATC AAGAAGCTGG AGCAACAGGG TAGTCAGGCC
AAGGTGTTGA GAAACACCAT CGGCGAAACC ATGCGGCTGC GTGATGAGTG GAAGAAAGCG
CATGACAGCG GTGCAGCGTC GGCATCCGGC TTACTGCGCA AGCTTGAAAC CAACCTCGAC
GTCTTACGCA AGCAGGGCGT TCAGGTTGGC AAACTCAGGC AGGAATATCA GTCTCTGGAC
CGTGTTGCCA AGGGCATTGA CCTTAAAGTC AAGGGACACC AACAGATCGA GCAGGGCAAG
GCCGGGCTCA AGTCGGGCAT CGGCACCGCC GTCGCGGGTG TCGGCGCATT GGCCGTACCG
ACCAAGATCA GTGCCGACTA TCAGGCGATC ATCCGGGACA TCGCGATCAA GGCCGGTGTG
GCCAACAAGC CGCAGGAAGC GGAGCTGACC ACCTCGGTGA TCAAGACTTC GCAAGACACG
GGCATGGCGC GCAATGACGT GGCTGACCTG GTCAACAAGC TGGTCGGTGC AGGCATGAGC
CTGGACAAGG CGCTGTCCTA CGCGCCGGTG GCTGCGAAGT TTGCGGTCGG GCAGGGGGCT
AGCGGCACCG ATACGGCCAA CATGATTCAG GCGCTGCAGC AGAACGCCAA AATCACCGAC
CCGAAAATGA TGGAAAAAGC CCTTGAGGCC GTCGCCATGC AGGGCCAGGC GGGTAGTTTT
GAAGCCAGCG ACATGGCGAA GTGGTTTCCG CAACTGCTTG CAGGTATGGG CAAGCTCGGT
GTTACGGGCA TGGACTCGGT GAGCCAGCTC GGCGCGATGC TGCAGGTGCA GATGAAAACA
GCCGGCGGCT CGGATGAAGC GGCCAACAAC CTGAAAAACT GGATGGAGAA GATCGGCTCC
ACCGACGTGG TGAAGTCGTA CAAGGACGTC GGTATCGATT ATCAGGGCTC GCTGAACACG
GGCATCCAAA AGGGCATGTC GACGCTTGAG TCCAGCTTTG CACTGGCTCA GCACTACATC
GAAAAGACTG ACCCTGAAAA AGCCAAAAAA ATGAAGGAGG CCACGGCCAA GATCAGCAAG
GAAGCTGATC CGAAAAAAGC GAAGGAAATG CTGGATTCGC TGGAGCAAGC ACTGCGTACC
GGCGATCTGT TCGCCGACAT GCAGGTGAAG GCCGCGCTGA CGGCTTACTC GCAGAACCGT
GGCATGTACG AGCAACTGAA AAAGGACGCT CAGAATGCTT CAGGGATTCT CGACAAGAAC
CTGGCCGAGC GTCGTGGCAC ATCGTCGCAG ATCTGGGCCG AGACGTTCCA GTCGGTCAAC
GACTCGATGC GCAGCATTGG TGACGCGATC CGACCTGTCA CCGACGCCGT TGCGAAAGGG
ATCACAGCAA CGGCCAAGGA ATTTACAGCG CTCTCAGATA CTTCCAAACC GGTAGTGCTG
GCCATCGCCT CTATCGGTGG CGGGTTGTTG GCACTGAAGT CTGCTGCCGG GGTGTTCAAA
ATCGGCAAAG GGCTGCTCAA CATTGGGCGT GGTTCGCTGG GCGGCAACCC GAACAAAGTC
CAGAAAGTCT TTGTGACCAA CTCTGGGGAC ACGGATGACA AACCAGAGGG CAAAGTCGGT
GCGGTCAAAG GGCTGCTGGA GACGGGCCTC AAGGCCTTCA AGGGCAAGGA TAAAGCCAAG
GGCCAGGACA AAAGCAAGAC TCAGGACGGC GACAAGGAAA AGCCAGACGG TGACGACGAT
GAGTCGGACG AGGGTGGCAA GACCGGGTTT GATCCTGTCG ACACCGGCCT GAAGATCCTG
GATCTGTTCG GCGAAGGCAG TAACGACGGC GATGGTGCAA AAGGTGGCGG CAGCAGCTCG
GAGCCGCAGA AAGTCTTTGT CGTCAATGCC AATGCTTTTG GCGGTGGTTC AGATGCACCG
GGTGATCAGC GTCGGTCTCG ACGCGGCCGC CGCCGTGGCG GAGCGGGTGG CGCTGGTGGC
CGTCGCGGTG GACCACCTAT GCCACCAAGG CCACCTGTTC CTCCTCCGCC TCCCGTGCCC
GCTGGTCGAC TGGCGCGTAT GGCTGGAGCT GCCGGGAAGT TGGGCGGTCT TGCCAAGGTG
GTTCCGGGTG CCAAGTTTCT GGACGCGGGC ATGCTGGCTC TGGACACGTA CCAGAATGCC
GAAACTCAGG ACGAGAAGGC CGAGGGCTAC GGCGGCGCGG CCGGAGGACT GGCCGGCGCG
CTGGCGGGCG GTGCGGCGGG TGCGGCCATT GGCTCCATTG TGCCCGTTGT TGGCACCGCC
ATCGGCGGGT TGGTGGGCGC ATTTCTCGGA GGCATGGGTG GTCAGGACGT CGGCGGCTTT
CTGGGCAAAG CGCTGTTTGG CTCAGACGAC AAAGCTGAGG CTGTTGCTGA CAAGTCGGGT
GATACCAAGC CGTCTGCTGC GCCTGGCGAT GTGGTCAAGG CGATGGCGGC GGTTGGGCCA
CCCCAGGCGT TGCCTGCTGT CATCAAGGCC GCCGAGCAAA GCAAGGCCGA GCCCGCGAAG
ATAGATCAGC AATTCACCTT CTCGCCGAAC ATGCCCGTCA GCGTACAGGG TGATGTGAAG
GATCCGGCGC AACTGGCACG AGAACTCGCG CCGTTTCTGC AGCGTCAATT TGAAGAGTTC
AGTCGGCAGG CGTCAGCCCG TCAATTGTTT GATGACCCAC ACGTGGGGTG A
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| Protein sequence | MANNLALGLV IGGSVSSTLG SAFSTVEGRI KKLEQQGSQA KVLRNTIGET MRLRDEWKKA
HDSGAASASG LLRKLETNLD VLRKQGVQVG KLRQEYQSLD RVAKGIDLKV KGHQQIEQGK
AGLKSGIGTA VAGVGALAVP TKISADYQAI IRDIAIKAGV ANKPQEAELT TSVIKTSQDT
GMARNDVADL VNKLVGAGMS LDKALSYAPV AAKFAVGQGA SGTDTANMIQ ALQQNAKITD
PKMMEKALEA VAMQGQAGSF EASDMAKWFP QLLAGMGKLG VTGMDSVSQL GAMLQVQMKT
AGGSDEAANN LKNWMEKIGS TDVVKSYKDV GIDYQGSLNT GIQKGMSTLE SSFALAQHYI
EKTDPEKAKK MKEATAKISK EADPKKAKEM LDSLEQALRT GDLFADMQVK AALTAYSQNR
GMYEQLKKDA QNASGILDKN LAERRGTSSQ IWAETFQSVN DSMRSIGDAI RPVTDAVAKG
ITATAKEFTA LSDTSKPVVL AIASIGGGLL ALKSAAGVFK IGKGLLNIGR GSLGGNPNKV
QKVFVTNSGD TDDKPEGKVG AVKGLLETGL KAFKGKDKAK GQDKSKTQDG DKEKPDGDDD
ESDEGGKTGF DPVDTGLKIL DLFGEGSNDG DGAKGGGSSS EPQKVFVVNA NAFGGGSDAP
GDQRRSRRGR RRGGAGGAGG RRGGPPMPPR PPVPPPPPVP AGRLARMAGA AGKLGGLAKV
VPGAKFLDAG MLALDTYQNA ETQDEKAEGY GGAAGGLAGA LAGGAAGAAI GSIVPVVGTA
IGGLVGAFLG GMGGQDVGGF LGKALFGSDD KAEAVADKSG DTKPSAAPGD VVKAMAAVGP
PQALPAVIKA AEQSKAEPAK IDQQFTFSPN MPVSVQGDVK DPAQLARELA PFLQRQFEEF
SRQASARQLF DDPHVG
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