Gene PSPTO_3387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3387 
Symbol 
ID1185047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3829451 
End bp3829780 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content42% 
IMG OID637394738 
Producthypothetical protein 
Protein accessionNP_793170 
Protein GI28870551 
COG category[S] Function unknown 
COG ID[COG4453] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACTT TAGACGAAAA GTTGAAGCCC AGTAAAACTG CACGTTTGGA AATTAAAACT 
ACTGACTTCG CTAAAGAGTT TATTCGTAAA GCAGCAACCG TTTCAGGTCT AGATATGACA
GCTTTCATAA TGGCTTCAGC GTTCGAAAAA GCTGAAGTCG TGATGGAAAA CCACCGAAGA
ATTGAGCTTT CTGAGAAGGC TTTTTCTAGG TTACATGAAA TCCTCAACGA GGAAGATACC
GATGCAACCC CAACCCCAGA GCTACTAAAA CTAATGAGAG GGCAACATGG ACAACGAGAA
CACCGAAGTA AATCTAGAGT ACAAGATTGA
 
Protein sequence
MTTLDEKLKP SKTARLEIKT TDFAKEFIRK AATVSGLDMT AFIMASAFEK AEVVMENHRR 
IELSEKAFSR LHEILNEEDT DATPTPELLK LMRGQHGQRE HRSKSRVQD