Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3308 |
Symbol | |
ID | 1184966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 3742834 |
End bp | 3743361 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637394658 |
Product | general secretion pathway protein N, putative |
Protein accession | NP_793091 |
Protein GI | 28870472 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.35635 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGGCT CTTTACGCCC GCTGGAGTGG TCGCTGCTGG CGCTGGCCGC GCTGCTGACG GGGCTCATCG CCCTGATTTT CAGCGGCGCT GCGCACTCGC CCGACTGGCT GCCCGAGCAG GCGCCGCGCA ATCCGCTCGA TCAGAAAGCC CAGGTGCACA GCGCGCCTTC GGCAACCCTG GACAGCCTGG CCAACACCTG GAAAACCCCC CTGTTCAGCC CTGATCGCAG CCCGGACGCG GCGGTGCGCA AGGCCGAGCA GGCCACCAGT CTGGCCGGCC TGACCCTCAC CGGGGTGATC ATGGACGGCT CGCTGCGTGT CGCATTGATC AAACAGGCCA GTGGTCCGGC GCTGAAAATT CGTCAGGGCG ACCGTTTGCC CAATGGCTGG ACGCTGGACC GCCTGGAGCC CACTCAGGCC ACTTTCAAAC TTGATGAGCG CACGCAAATC CTGCGTCTGC CTGCGCTGCG CCTGCCGCCG CCGTCGAGTA CACCGCCGAT TACCTTAACC AACGATTCCA CCCTGTGA
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Protein sequence | MTGSLRPLEW SLLALAALLT GLIALIFSGA AHSPDWLPEQ APRNPLDQKA QVHSAPSATL DSLANTWKTP LFSPDRSPDA AVRKAEQATS LAGLTLTGVI MDGSLRVALI KQASGPALKI RQGDRLPNGW TLDRLEPTQA TFKLDERTQI LRLPALRLPP PSSTPPITLT NDSTL
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