Gene PSPTO_3308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3308 
Symbol 
ID1184966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3742834 
End bp3743361 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content66% 
IMG OID637394658 
Productgeneral secretion pathway protein N, putative 
Protein accessionNP_793091 
Protein GI28870472 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.35635 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGGCT CTTTACGCCC GCTGGAGTGG TCGCTGCTGG CGCTGGCCGC GCTGCTGACG 
GGGCTCATCG CCCTGATTTT CAGCGGCGCT GCGCACTCGC CCGACTGGCT GCCCGAGCAG
GCGCCGCGCA ATCCGCTCGA TCAGAAAGCC CAGGTGCACA GCGCGCCTTC GGCAACCCTG
GACAGCCTGG CCAACACCTG GAAAACCCCC CTGTTCAGCC CTGATCGCAG CCCGGACGCG
GCGGTGCGCA AGGCCGAGCA GGCCACCAGT CTGGCCGGCC TGACCCTCAC CGGGGTGATC
ATGGACGGCT CGCTGCGTGT CGCATTGATC AAACAGGCCA GTGGTCCGGC GCTGAAAATT
CGTCAGGGCG ACCGTTTGCC CAATGGCTGG ACGCTGGACC GCCTGGAGCC CACTCAGGCC
ACTTTCAAAC TTGATGAGCG CACGCAAATC CTGCGTCTGC CTGCGCTGCG CCTGCCGCCG
CCGTCGAGTA CACCGCCGAT TACCTTAACC AACGATTCCA CCCTGTGA
 
Protein sequence
MTGSLRPLEW SLLALAALLT GLIALIFSGA AHSPDWLPEQ APRNPLDQKA QVHSAPSATL 
DSLANTWKTP LFSPDRSPDA AVRKAEQATS LAGLTLTGVI MDGSLRVALI KQASGPALKI
RQGDRLPNGW TLDRLEPTQA TFKLDERTQI LRLPALRLPP PSSTPPITLT NDSTL