Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3261 |
Symbol | |
ID | 1184919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 3685988 |
End bp | 3686242 |
Gene Length | 255 bp |
Protein Length | 84 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637394611 |
Product | hypothetical protein |
Protein accession | NP_793044 |
Protein GI | 28870425 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00766306 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGAGTC ATGCAGAGGT TGTGCCAGTT TGTGGCTGGG GCCGCCTCGC TGCGTTGTCG GGGTGTTTGC GGGGTAATAT GCCTGCACAG TCCGCTCCGG TATTGCCCTG GATTGGTGCG TATGACCTGT TCGCTGTCTC AAATGCGGTC GAGATAATGC TTCGCGTGGT GATTCAGGTT GTGACGCTCA GCGTCAGGGC GAAGGAACCC GACGAAGTCG GGCCGGAAAC GGAGCCGGGA TTTTGCTTGC TTTGA
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Protein sequence | MSSHAEVVPV CGWGRLAALS GCLRGNMPAQ SAPVLPWIGA YDLFAVSNAV EIMLRVVIQV VTLSVRAKEP DEVGPETEPG FCLL
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