| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3242 |
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| Symbol | |
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| ID | 1184900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3663587 |
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| End bp | 3666103 |
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| Gene Length | 2517 bp |
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| Protein Length | 838 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637394593 |
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| Product | TonB-dependent receptor, putative |
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| Protein accession | NP_793026 |
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| Protein GI | 28870407 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACAGGC GTCGCAGCAG GGCTCAACTG GTTGGCTTCA CACTCGGTTC ACTGGCGCTT
GGTATTGCCA GCGGGCGTTT ACAGGCCGCC GAAGCCGGCC CTACCGAGCA CGTGCAAGTG
GTGGGGCAGG CGGCGAGCAT CGACAACGCG CTCAAGGAAC AGCGCAGCGC CGACAGCATC
AAAAGCGTGG TGCATGCCGA CGGCGTGGCG CAGTTGCCTG ACCAGAACGT GGCCGAAGCG
GTGCAGCGTC TGCCGGGCGT GAGTGTCGAG CGCGATCAGG GGGAAGGGCG CTTTGTAACG
GTGCGTGGCC TGGCCCCTGA CCTGAACAGC GTGACTATCA ACGGCACGCT GGTGCCCGCC
CCGGAAAGTG GCCGACGCGC CGTGGCGCTG GACGTTCTGC CGGCCGAACT GGTGCAGTCG
CTGTCAGTGA TCAAGACCCT GACCCCGGAC ATGGATGCCA ACTCGCTGGG TGGCACCATC
GACGTCGAGA GTTTGTCTGC CTTCGACCAC AAGGGTTTGT TCTACACCGG CAGCAGCGAG
GCCAGCTACG ACAAGAACAC CCGCCAGACC AGCCCCAAGT TTTCTGGCGC GGCGAGCAAC
CGTTTCAGCC TTGGCGACGG CATCGACAAC GTTGGCGTGG CTGCAGCGTT GAGCTGGCAG
AAGCGCGACT TCGGCTCCGA CAATGTCGAG ACCGGCGGTG ACTGGGACGG CACGCGCCTG
CAGTCATTCG AACAGCGCGA CTATGACATC AGCCGCGAGC GTGCTGGCGG TGGCCTGAAC
TTCGATTACA AACCCGATGA CGTCAGCAAA TATTACCTGC GCACCCTGTA CAGCCGCTTC
AAGGACGACG AAGTACGCAC CACCAACGCA TTCGAGTTTG CCGATGCGCA GCGTGCAGGC
GAGACCGGCG ATGCCGAGGG CACCCGCAAG CTCAAGGCGC GCACCGAAAC CCAGGAAATC
CAGTCCTACG TGTTTGGCGG CGAGCGCATG ATGGGCCTGT GGACCCTCAG CGGCCAGGCC
GGTTACAGCG AATCCAGCGA AGACAGCCCC GGTCACATCG CCGGCGCCAC GTTCGTGGGC
AACGACGATT TTGCCGGTAC CGGTTTCTAC GACCGCGACA AACCCAGGCC GATTGTCGGC
TCCTCGTTCT ACGACACTTC GAACTTCACC CTGGACAAGG TCGATTGGGA AAAGCAGTAC
ACCAAGGACA CCGAAAAAAA CGTACGTCTG GACCTGGCCC GCGACTACGA TTTCAAAGGC
TACGCCTCGC AGTTCAAGTT TGGCGGCAAG GTCAGCCGAC GTGACAAGAG CAACGATCTG
GAAGTCTGGA AATACGAGGA TTTCGACGAC CAGGGTTTCA GCGATCAGCA ACTGAACCTC
AGCCAGTTCC AGAAGGGCAG CATCGACTAT CGACTGGGCA ACTTTGGCAG TGGCATCAGC
CCCGGCGCCG TCAAAGGGCT GATAGGCGGC CTTGATGCAG CCAGCGCCTA CGACCCCGCC
GAGTCCCGCG CGAATGACTT CAAGATCAAC GAAGACATCA ACGCCGGTTA CTTCATGAAC
ACCCTGGATG TCGACAAATG GCGCTTCATC GCCGGCCTGC GCTACGAAGG CACGGAAATG
GACGCCAAGG GCACGGGGGT GCGTGACGGT GCTTTCGAGC CCAACGACAC CAAGCGCCGT
TATCACCACT GGTTACCGGG GCTGCATGCG CGGTATCAGA TCGACAAAAG CACCCAGTTG
CGTGCCGCCT GGACCAAAAC TGTAGTGCGC CCGACCTTCG GCCAGCTGGC ACCGGGCTTT
GTAATCGACG ATGACGAAGC CACGTTTGGC AATCCGAACC TCAAGCCGCT GGAGTCCAGT
AACCTGGACC TGGGCATCGA ACACTTCATG GGCCGCGCGG GCACGGTGTC TGCGTTCGTG
TTCTACAAGG ACATCCAGAA CTTCGTCTAC AACACCGACC TGGCGGGCAC TGGACAATGG
GCGAACTTCT CCGAAGCCAA CACCTTCGCC AACGGCGACA AGGCCAAGCT GTATGGGCTT
GAGCTGGCCT ACTCACAGAA GCTCGACTGG CTGCCATCAC CATGGGACGG CCTCCTGCTG
GGAGCCAACG CCACGTTGAG CCGCTCCGAC GCGAGCATCA ACGGCTTCGA CCAGAGCACT
GGGACCAATC GCAAGCGCGA CATCGACCTG CCCAGCCAGT CGAAAACCGT CGGTAACGTC
ATGCTCGGTT GGGAGAACGA CACCCTCAGC CTGCGTCTGT CGGCCAACTA TAAGTCAGCC
TATCTGTATG AACTGGCGGC GATTGGCGAC AAGGACCACG ACCAGTACGT GGATGCGCAG
ACCTTCGTCG ATTTCAGCGC GCGTTACTCA CTGACCAAGA ACCTCAAGGT CAGTTTCGAG
GCGCAGAACC TCACCGATCA GCCGTATTTC GTCTACAGCG GCCATCGCGC CTACAACGGC
CAGTACGAAG AGTACGGCCC GACCTACAAA GTCGGCCTGA CGTTTACCCA CTTCTGA
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| Protein sequence | MYRRRSRAQL VGFTLGSLAL GIASGRLQAA EAGPTEHVQV VGQAASIDNA LKEQRSADSI
KSVVHADGVA QLPDQNVAEA VQRLPGVSVE RDQGEGRFVT VRGLAPDLNS VTINGTLVPA
PESGRRAVAL DVLPAELVQS LSVIKTLTPD MDANSLGGTI DVESLSAFDH KGLFYTGSSE
ASYDKNTRQT SPKFSGAASN RFSLGDGIDN VGVAAALSWQ KRDFGSDNVE TGGDWDGTRL
QSFEQRDYDI SRERAGGGLN FDYKPDDVSK YYLRTLYSRF KDDEVRTTNA FEFADAQRAG
ETGDAEGTRK LKARTETQEI QSYVFGGERM MGLWTLSGQA GYSESSEDSP GHIAGATFVG
NDDFAGTGFY DRDKPRPIVG SSFYDTSNFT LDKVDWEKQY TKDTEKNVRL DLARDYDFKG
YASQFKFGGK VSRRDKSNDL EVWKYEDFDD QGFSDQQLNL SQFQKGSIDY RLGNFGSGIS
PGAVKGLIGG LDAASAYDPA ESRANDFKIN EDINAGYFMN TLDVDKWRFI AGLRYEGTEM
DAKGTGVRDG AFEPNDTKRR YHHWLPGLHA RYQIDKSTQL RAAWTKTVVR PTFGQLAPGF
VIDDDEATFG NPNLKPLESS NLDLGIEHFM GRAGTVSAFV FYKDIQNFVY NTDLAGTGQW
ANFSEANTFA NGDKAKLYGL ELAYSQKLDW LPSPWDGLLL GANATLSRSD ASINGFDQST
GTNRKRDIDL PSQSKTVGNV MLGWENDTLS LRLSANYKSA YLYELAAIGD KDHDQYVDAQ
TFVDFSARYS LTKNLKVSFE AQNLTDQPYF VYSGHRAYNG QYEEYGPTYK VGLTFTHF
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