| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3238 |
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| Symbol | |
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| ID | 1184896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3659577 |
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| End bp | 3660401 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637394589 |
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| Product | tonB protein, putative |
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| Protein accession | NP_793022 |
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| Protein GI | 28870403 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.70516 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCTGA CGCTCGAGGA TAGCCGGCCA CAGCGCGAGT GGCTGAACGG GCCGTGGCTG
CGCAGCAATG GTCTGGCGGC GGCGATTGCG CTGGCCTTGC ACGGTGCGCT GCTGGGTGGC
CTGATGCTCG GCTGGAACGC GCAGGAAAAA CGCCCTGAGC CGCCGAGAAC ACTGACCACC
CAACTGGTGA TGCTGCCAGC ACCTGCACCT GTGGCGGCAG CGCCAGTCGC CGTTGCCGAA
GCTGTTCAAA CGCCGCCACC GGCCCCCTTG GTTGCACCGC CGCCCGTGGT AAAACCACTA
GAAGCCCCCA AACCGCAGGC AGAACCGCAG CGCCAGCTTG AGCAGGCGGC GCTGGCACGC
AAACGCGTCG ATGAGCAGAA GCGCGAGCGT GAAACCGAGC AACGCCAGCG TGCGCAAAAC
GCTCGGGAAG CCGAGCAGCA GCGCCAACAG GCTCAGGCTG AGCAGCAACG CCAGGCCGAG
CAGGCGCGTC AGTCCGCCGA GCGTGCTCGT CAATCGCAGG TGCAGCAACA GACACAGCAG
CAAGCCGCTG CCGACAGCAG TCAATACCAG CCGCTGAGCA AGGAAGCCCC TGACTACCCC
GAGCGGGCGC TGGACAAAGG CATAGAGGGG GATTGCACGG TGGTCTACGA CGTCTCGCCG
CAAGGCAAAG TCGTCAACCC GCAAGTGCAG GGCAGCTGCC ACCCGCTGTT CATGCGCCCG
TCGCTGGCTG CAGCAGAGAC TTTTCGCTAT CAGCCAAGGA TCGTCGAGGG CAGGGCGGTG
ATGGTGTCCG GCGTGAAAAA TACCTTTCAC TACCGGATCA AGTAG
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| Protein sequence | MTLTLEDSRP QREWLNGPWL RSNGLAAAIA LALHGALLGG LMLGWNAQEK RPEPPRTLTT
QLVMLPAPAP VAAAPVAVAE AVQTPPPAPL VAPPPVVKPL EAPKPQAEPQ RQLEQAALAR
KRVDEQKRER ETEQRQRAQN AREAEQQRQQ AQAEQQRQAE QARQSAERAR QSQVQQQTQQ
QAAADSSQYQ PLSKEAPDYP ERALDKGIEG DCTVVYDVSP QGKVVNPQVQ GSCHPLFMRP
SLAAAETFRY QPRIVEGRAV MVSGVKNTFH YRIK
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