| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3120 |
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| Symbol | |
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| ID | 1184777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3505396 |
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| End bp | 3506214 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637394478 |
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| Product | Cof-like hydrolase family protein |
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| Protein accession | NP_792912 |
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| Protein GI | 28870293 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
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| TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0330489 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGAGC CGTCTTCATC CTCTGTACAG TTTCTGTTGT CCGATATCGA TGGCACGTTG
TTGCGCCGCG ATCACAGCTT GAGTCAGGTC AACATCGAAG CGATCGGGCG CCTGCGTCAG
GCAGGCATCC ACTTCACCCT GGCCAGTAGC CGACCGCCAA GGGCCATGCG CCAGGTCATC
GAAGCGTTGG GTGTCGATCT GCCAACGGTG GCCTTCAACG GCGGCACCAT CACTCATCCC
GATGGCAGCC TGCTCGCGGC TCATCGTATT GATCCGGCTG CGGTCAGGAC CTGCCTTGAG
TTGTTCGCAG GGCACAACGT CGCTATCTGG GTGTTTGCCG ATGATCAGTG GCTGCTGCTC
GACCCTGGCG CGGACTACGT CGATCATGAG CGCGACGCGC TGGGCTACGA TTATGTTCAG
GTCGAGAGTT TCGAGTCGTA CCTTGATCGC GTCGACAAGA TCGTCGCAGC CAGTGCCGAT
TTCGAGCTGC TGAAGACCCT GGAGTCACAG CTCAACCCGC AGATCGAAGG CCTGGCGCTG
GCCGCCCGCT CGCAAAAATA CTACCTGGAC GTGACCGCGC TGGACGCCAA CAAGGGCTCG
GCACTGGTCG CGCTGGCGAA ATACCTGGGT GTCGAGTTGT CCCGTACCGC AGCCATCGGT
GATGGCGGTA ACGACGTGGC GATGTTTCAC GCGGCCGGGT TGTCCATCGC GATGGGGCAG
GGTGAGCAGA CAGTCAAGGG ACAGGCGGAC CATGTTACAG ATAGCAATGA GCAGGACGGT
GTTGCCAAAG CCATCGAGCG TTACATCCTG CCAGCCTGA
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| Protein sequence | MSEPSSSSVQ FLLSDIDGTL LRRDHSLSQV NIEAIGRLRQ AGIHFTLASS RPPRAMRQVI
EALGVDLPTV AFNGGTITHP DGSLLAAHRI DPAAVRTCLE LFAGHNVAIW VFADDQWLLL
DPGADYVDHE RDALGYDYVQ VESFESYLDR VDKIVAASAD FELLKTLESQ LNPQIEGLAL
AARSQKYYLD VTALDANKGS ALVALAKYLG VELSRTAAIG DGGNDVAMFH AAGLSIAMGQ
GEQTVKGQAD HVTDSNEQDG VAKAIERYIL PA
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