| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3074 |
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| Symbol | |
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| ID | 1184731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3456718 |
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| End bp | 3457659 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637394434 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | NP_792868 |
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| Protein GI | 28870249 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.618991 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCATTCCC TGACTTCGCG TGCACCCGCC GAGCCCGATG AACGCCTCCA GGCACTCAAG
CGGCTTATCG GAAAGGTCAC CCCGCAGATT GGCTTGAACG ACGTCTGCAA AACGTCCATT
CCAGACCTCA CCTTCTACCG AATGGACAAA CTGGCCACGC CCACCTACTG CATTTACGAG
CCCTGTGTGG CCATCATTCT GCAGGGCGCC AAGGAGATCA CCTTCGGCGA GCAAGCCTGT
GAGTTTGCGC AAGGGTCTTT CTTCGTCACA TCGGTCGATA TTCCGACGCT TGCTCGCGTT
ACTGCCGCCA GCGAGCAGAC ACCCTATTTA TCCATTGTGT TGAAGCTCGA TCTTTCCATG
CTCAACGACG TTATCCAGAC CCAGGCACCG CTGAAGCAAG AGGCGACACC TGAGGCCCGA
GGCTTTGCGT CTGGCATGGC ATCAAGTGAA ATGCTCGACG CCTTCGCTCG ACTCTCCGCG
TTGACCGGGC AGCCGCTGGA AGCAGGCTTG ATGTCGGACC TTATCAAGCG GGAGATATGT
GTTCGGTTGT TGCTGAGTTG CGCTGGCCAG TGGTTACGCA GCGTGACGCG CGATGGTTAC
AGAGACAAAG GCATCGTGAG GGCCATTGAG TGGTTGAAAC TTCACTACGA CGAGCCGCTG
CATGTAGCTC AACTGGCTCA GCTATCGGGA ATGGCCAGTT CGACGCTGCA TCACAACTTT
CGCAAGCTGA CCGGCACCAG CCCTGTTCAG TATCAAAAGT CGTTACGGTT GCAAGCCGCG
CGCAGCCTGA TGCTGACCGA GAGGGTTGAC GTGAACACCG CCGCGCTGCG AGTGGGCTAT
GAAAGCGTCG CGCAGTTCAG TCGCGAATAC GCCCGGCGCT TCGGAGCGCC ACCCTCCAGA
GACATCAAGT ACGCCCGGGA AGCTGGCGGG CGGCGCGACT AG
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| Protein sequence | MHSLTSRAPA EPDERLQALK RLIGKVTPQI GLNDVCKTSI PDLTFYRMDK LATPTYCIYE
PCVAIILQGA KEITFGEQAC EFAQGSFFVT SVDIPTLARV TAASEQTPYL SIVLKLDLSM
LNDVIQTQAP LKQEATPEAR GFASGMASSE MLDAFARLSA LTGQPLEAGL MSDLIKREIC
VRLLLSCAGQ WLRSVTRDGY RDKGIVRAIE WLKLHYDEPL HVAQLAQLSG MASSTLHHNF
RKLTGTSPVQ YQKSLRLQAA RSLMLTERVD VNTAALRVGY ESVAQFSREY ARRFGAPPSR
DIKYAREAGG RRD
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