| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3008 |
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| Symbol | |
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| ID | 1184664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3382663 |
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| End bp | 3383592 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637394370 |
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| Product | amino acid ABC transporter, periplasmic amino acid-binding protein |
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| Protein accession | NP_792805 |
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| Protein GI | 28870186 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.324637 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGTGA ACACTGCCCG TATCACCCTG CTGACGATTG CCGTCAGTCT GGCGCAAGGT
GCCTTTGCGT CCACCGCGCA ACCGGTCGAC CTGAGCCCTG ATCGACAGCG CATTCATGTG
CCACGCAACG AAGCGGCCAT CGCGCAGATC CCGGCGGGCT TCAAGTTCGC CCAGCCGGGC
AAATTCACCG TGGCTGTTTC CGGCGTTGCC GGGCCGCCTT TGGCGCTGCT GGCCAATGAC
GACAAGACCA CCATCGGCAG CGAGGCAGAC ACCGCGCAAC TGGTGGCGGA TAGCCTGGGT
TTGCAATTGA ACGTGGTGCA GACCAGTTGG GAGGACTGGC CGCTGGGCGT CAGCTCGGGC
AAATACGACG CGGTGATCAG CAATGTCACG GTGACAGAAG CGCGCAAAAA ACGCTTTGAT
TTCGCCACCT ACCGGCAGGA TGTGCTGGGT TTTTACGTCA AGACTGGCAG CAAAATCAGC
GAGATCAAAC AGGCGTCGGA CATCGCCGGG CTGAAAATCA TCGTCGGCTC CGGCACCAAT
CAGGAAAAGG TCCTGTTGGC GTGGAACGAA GCCAACGAAA AGGCCGGCAT CAAACCCGCA
CTGCTGCAGT ACTTCGATGA TCAGGCAGCG GCCCAGCTCG CCATTCGCTC GGGCCGCAGC
GACGCGCTGT TCGGGCCTAA CTCGGTGTAT GCCTATTCAG CGGCCATTAC GGGAGGCATC
AAACGTGTGG GCACGGTCAA TGGCGGCTGG CCACTGCAAG CCGATATCGC CGTGACCACA
CGCAAGGACA ACGGTCTGGT CAAACCCATT CATACCGCAC TGGAGGGTGC GATTGCCGGC
GGCCAGTACG AACAGGTGTT GCAGCGTTGG GGGTTGGATG TGGAGCGCGT CGACACGTCG
CTGATCAACC CACCCGGCCT GCCGGACTGA
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| Protein sequence | MSVNTARITL LTIAVSLAQG AFASTAQPVD LSPDRQRIHV PRNEAAIAQI PAGFKFAQPG
KFTVAVSGVA GPPLALLAND DKTTIGSEAD TAQLVADSLG LQLNVVQTSW EDWPLGVSSG
KYDAVISNVT VTEARKKRFD FATYRQDVLG FYVKTGSKIS EIKQASDIAG LKIIVGSGTN
QEKVLLAWNE ANEKAGIKPA LLQYFDDQAA AQLAIRSGRS DALFGPNSVY AYSAAITGGI
KRVGTVNGGW PLQADIAVTT RKDNGLVKPI HTALEGAIAG GQYEQVLQRW GLDVERVDTS
LINPPGLPD
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