Gene PSPTO_2998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2998 
Symbol 
ID1184654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3371648 
End bp3372076 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content59% 
IMG OID637394360 
Producthypothetical protein 
Protein accessionNP_792795 
Protein GI28870176 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0148355 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACATT ACTACGCTGC TGCACTACTC GCCCTGTCAC TGCCGGGTCT GGCCCAGGCA 
GGCGACAGCC TCGCCAGCCT GCCGGCCATT ACACAAGCCC TGAACACCGG AGCGTCGGTG
GCAGTGGTGA TTGATCTGGG GCAGTGCAAA TCCTCGGTCG CAGGTGCCGA ACCGTCCAAA
ACCAAAGGCG GCAAACGCAT TGATGCCTAC CGCATCACGC CTGATGGCAC CCTCGCGTTT
TCGGACACGC ACTTCACCCT CGACCGCGAA AACAAGCCCA TCGAGCAGTT CATTCGCTAC
CAGATACGCG CCGACGGTAC GGCGGGTTTC AGCATGACGA CGTTGAGTGT TCCGGGCTAT
CAGCAGGTGG GCAATGCGGT CAGTTACGAA TGTGCGATTG GCAAGGGCTT GAGTTTTTTT
GCCAACTAG
 
Protein sequence
MKHYYAAALL ALSLPGLAQA GDSLASLPAI TQALNTGASV AVVIDLGQCK SSVAGAEPSK 
TKGGKRIDAY RITPDGTLAF SDTHFTLDRE NKPIEQFIRY QIRADGTAGF SMTTLSVPGY
QQVGNAVSYE CAIGKGLSFF AN