Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2998 |
Symbol | |
ID | 1184654 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 3371648 |
End bp | 3372076 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637394360 |
Product | hypothetical protein |
Protein accession | NP_792795 |
Protein GI | 28870176 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0148355 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACATT ACTACGCTGC TGCACTACTC GCCCTGTCAC TGCCGGGTCT GGCCCAGGCA GGCGACAGCC TCGCCAGCCT GCCGGCCATT ACACAAGCCC TGAACACCGG AGCGTCGGTG GCAGTGGTGA TTGATCTGGG GCAGTGCAAA TCCTCGGTCG CAGGTGCCGA ACCGTCCAAA ACCAAAGGCG GCAAACGCAT TGATGCCTAC CGCATCACGC CTGATGGCAC CCTCGCGTTT TCGGACACGC ACTTCACCCT CGACCGCGAA AACAAGCCCA TCGAGCAGTT CATTCGCTAC CAGATACGCG CCGACGGTAC GGCGGGTTTC AGCATGACGA CGTTGAGTGT TCCGGGCTAT CAGCAGGTGG GCAATGCGGT CAGTTACGAA TGTGCGATTG GCAAGGGCTT GAGTTTTTTT GCCAACTAG
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Protein sequence | MKHYYAAALL ALSLPGLAQA GDSLASLPAI TQALNTGASV AVVIDLGQCK SSVAGAEPSK TKGGKRIDAY RITPDGTLAF SDTHFTLDRE NKPIEQFIRY QIRADGTAGF SMTTLSVPGY QQVGNAVSYE CAIGKGLSFF AN
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