| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2914 |
|---|
| Symbol | |
|---|
| ID | 1184568 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 3279070 |
|---|
| End bp | 3279810 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637394275 |
|---|
| Product | glutamine ABC transporter, permease protein |
|---|
| Protein accession | NP_792712 |
|---|
| Protein GI | 28870093 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.277717 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGATG TGTTCACGAT TGTCCGCGAT AACTGGACCC TGCTGCTGGT CGGTCAGTAC
CCTCATGGGC CGATGGGCGG GCTGGTTTCA ACGCTGATTC TGGCTGCGCT GGCGTTGTTG
CTGGCGTTCC CTCTGGGCTT GCTGCTGTCT CTGGCGCGGG TTTCGCCGTG GCGCTGGCTG
CGTTACCCGG CGACGGTCTG GGTTTACGTG ATGCGCGGCA TTCCGCTGTT GATGGTGATT
TTCTGGACCT ACTTTCTGGT CCCGTTGCTG ATCGGCCATA ACATTACCGG CTTTACCACC
ATGCTCTGCA CGCTGGTGGT TTATCAGAGC GCGTACCTGT GCGAAATCAT TAGCGGGGCC
ATTCAGGCGC TGCCGGCCGG TCAATACGAA GCATCCCGCG CGCTGGGCAT GGGCTATCTG
CGCACCACAG TCTGGGTGAT TTTGCCGCAG GCGCTTTATA ACGCGTTGCC CAGCCTGATC
AGCCAGTTCA TTTCGATCAT CAAGGAAACC TCGCTGGGTT ATGTGATCAA CGTTCAGGAA
GTGACCTTCG CCGCCAATCA GATCAACAAC CAACTGCTGA CCAAGCCGTT TCAGGTGTTC
TTCATTCTGG CGATCACCTA CTACGTGCTG TGCTACGGCC TGACCCGGCT CGCCGCCGTC
GTGGAACAGC GAATTGCCCG CAAGCGCGAG GGCACTGTGT CGCCTGTAGC CGTTGCGCGG
CCTTTGACTA CCGATAAGTG A
|
|---|
| Protein sequence | MLDVFTIVRD NWTLLLVGQY PHGPMGGLVS TLILAALALL LAFPLGLLLS LARVSPWRWL
RYPATVWVYV MRGIPLLMVI FWTYFLVPLL IGHNITGFTT MLCTLVVYQS AYLCEIISGA
IQALPAGQYE ASRALGMGYL RTTVWVILPQ ALYNALPSLI SQFISIIKET SLGYVINVQE
VTFAANQINN QLLTKPFQVF FILAITYYVL CYGLTRLAAV VEQRIARKRE GTVSPVAVAR
PLTTDK
|
|---|
| |