Gene PSPTO_2878 details

Gene Information

• Locus tag: PSPTO_2878
• ID: 1184532
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 3241618
• End bp: 3242358
• Gene Length: 741 bp
• Protein Length: 246 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 637394242
• Product: lipoprotein, putative
• Protein accession: NP_792679
• Protein GI: 28870060

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.377315
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACACG TACGTAGCCA TCTGCCGAGG GTCCTGCTGG GCCTGATGAT CTCTGTCAGC 
CTGGTGCTGG CCGGCTGTGC CAACAACGGC ACCGGCAGCA GCATGCTCGG TGGTTCCGGC 
ACCGACCCCG ATCCGCGCCT GACCAAAAGT ACCGATTCGT CATTTTTCTC CACTTCGGGC 
CTCACCGCCT GCGCGGCCGC TGCCGGGGTT GGCATTCTGG CCTGTGCGGT GGCGAGCCCC 
AGCGACAAGG TCAAATGCAT GGTCGTGGCC GGTATTGCAG CGTGCGGCGT GGCCATGGGG 
GCGAACTATT ACTACGACTA CCGTCGCAGC AAGTACTCCA ATACCGCACA GCGCCTGCAG 
TTGATGAATG ACGACGTAAA AGCCGACACC GAAAAAGTGG CCCAGCGCAC CTACACGCTG 
CAACAGGTGA TCAACGACGA CAAAGAGCGC ATCGCCGGTA TCCAGAAGTC GATCAAAACC 
AAGACGCTGG ACAAAGCCAA GGCACAGCAA GAGATCGCCA GTGTCGACAG CAACCTGGCG 
CAGATGAACA AGGACCTGAC CGGCATGCGC TCCAAAGTGG CTGAGTACAA GAAGACCGCT 
GATCTTGAGC GCGCCAGCGA CGGCGGCACG CAGGTCACTG CGATCGACGG CGAGATCAGC 
AAAATGAACA GCAAGGTCGC GTCCTTGCAA AAAGAAGTGG ATGGCCTCTA CAGCCAGCGC 
CAAGCCATCA CCTTAGGTTG A 

 

Protein sequence

MKHVRSHLPR VLLGLMISVS LVLAGCANNG TGSSMLGGSG TDPDPRLTKS TDSSFFSTSG 
LTACAAAAGV GILACAVASP SDKVKCMVVA GIAACGVAMG ANYYYDYRRS KYSNTAQRLQ 
LMNDDVKADT EKVAQRTYTL QQVINDDKER IAGIQKSIKT KTLDKAKAQQ EIASVDSNLA 
QMNKDLTGMR SKVAEYKKTA DLERASDGGT QVTAIDGEIS KMNSKVASLQ KEVDGLYSQR 
QAITLG