6 homologs were found in PanDaTox collection
for query gene PSPTO_2873 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004578  PSPTO_2873  hypothetical protein  100 
 
 
345 aa  698    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.49643  n/a   
 
 
-
 
NC_007005  Psyr_2630  hypothetical protein  88.12 
 
 
342 aa  547  1e-155  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.190303  normal 
 
 
-
 
NC_013421  Pecwa_0468  hypothetical protein  36.55 
 
 
326 aa  168  1e-40  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009425  Ent638_4237  hypothetical protein  35.84 
 
 
311 aa  165  1.0000000000000001e-39  Enterobacter sp. 638  Bacteria  normal  0.761374  normal 
 
 
-
 
NC_012560  Avin_52060  hypothetical protein  34.24 
 
 
338 aa  159  6e-38  Azotobacter vinelandii DJ  Bacteria  normal  0.118841  n/a   
 
 
-
 
NC_007912  Sde_2708  translation initiation factor IF-2  51.35 
 
 
908 aa  42.7  0.01  Saccharophagus degradans 2-40  Bacteria  normal  0.334172  normal  0.377403 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>