Gene PSPTO_2873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2873 
Symbol 
ID1184527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3235122 
End bp3236159 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content61% 
IMG OID637394237 
Producthypothetical protein 
Protein accessionNP_792674 
Protein GI28870055 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.49643 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCATCA CCATCAAACT CTCACCGCTG GCGAGCCCGG TTCCCGGCAG TGGCTTTCTC 
CAGGTACGTG GCTGGGAGCA TGACGCAGGT AATCTGGAAT TTGCCATTCA GCGCAACCAG
GACGATTACT ACCTGCAACA CAACCAGCAA TGGGCCAATG CGCCCTGCTG GTTCGCCCAG
CATTTTGTGG AAGACGCCCA TGGCGATTCG ATCAGCCATG AAGTAGGCCC TGACATCGTC
GACCCGCTTC TGCAGAACTC GGTCACCGGG GTATTCAATT TTCGCCTGCG CAACCCGGAC
GGCAGTGGCG AAGACGATAA CCCAATGAAA TTGATGGAGG GCCTGGCCCT CTCCGGCGCG
GGCAGCGCCA CCGGTCCTGG TGCCGCGCAA ACCACTGTCA GTATCGCCCC GGCACAACCG
ACCGTGCAGC CAGTGCCAGA ACCTGCCCCG GCTCCGCAGC CTGAAACCAT CGAGCAACCA
TTGCCGGAGC CGATTGTCGA GCCTGTACCT CCGGCACCGG TGCCCCAAGC CAAAAACCGT
ACGGTGCTGC TGCTGATTAT CGGTCTGGCA TTGCTCGCCA TCATCGCCGC AGGGCTGTGG
TTCTGGCTCA AGAAGCCGCC TGCCCCCGAG CCAACTGCTG CTGCCGCTGC AACGACTCCT
GCCGATGTCG CGTCTCCTCC GGCAGCGCCC GCCGCGCCTT GCAGCGTTGA AGCGTTGAAC
ACCGAAAACG AGTTGAGCTT CGTACAAGGC TGCATCAAGC AGGCCCCTGA CAGCGCAACA
CTGTTGAACG TCATCGGCCT GGCCAAAAGC AACAAGCAAT GCGGTGTCGC CCAGCGGCTC
TACGCCAATC GCGCCCAGGC CGGCAACGTC GAAGTGGCTC AGGCCTACGC GCGTGAGTAC
GACCCCAAAT ACCTGCAACC CAGCGCCTGT TTCACTGCGC CGGACAATGC CACTGCCGCT
TACTGGTATG AAACCATTCT GGGCTATCAG GCAGACAACG CAGAAGCCGT GCAACGCCTG
AAGGAGCTCA AGCCGTGA
 
Protein sequence
MSITIKLSPL ASPVPGSGFL QVRGWEHDAG NLEFAIQRNQ DDYYLQHNQQ WANAPCWFAQ 
HFVEDAHGDS ISHEVGPDIV DPLLQNSVTG VFNFRLRNPD GSGEDDNPMK LMEGLALSGA
GSATGPGAAQ TTVSIAPAQP TVQPVPEPAP APQPETIEQP LPEPIVEPVP PAPVPQAKNR
TVLLLIIGLA LLAIIAAGLW FWLKKPPAPE PTAAAAATTP ADVASPPAAP AAPCSVEALN
TENELSFVQG CIKQAPDSAT LLNVIGLAKS NKQCGVAQRL YANRAQAGNV EVAQAYAREY
DPKYLQPSAC FTAPDNATAA YWYETILGYQ ADNAEAVQRL KELKP