Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2873 |
Symbol | |
ID | 1184527 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 3235122 |
End bp | 3236159 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637394237 |
Product | hypothetical protein |
Protein accession | NP_792674 |
Protein GI | 28870055 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.49643 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCATCA CCATCAAACT CTCACCGCTG GCGAGCCCGG TTCCCGGCAG TGGCTTTCTC CAGGTACGTG GCTGGGAGCA TGACGCAGGT AATCTGGAAT TTGCCATTCA GCGCAACCAG GACGATTACT ACCTGCAACA CAACCAGCAA TGGGCCAATG CGCCCTGCTG GTTCGCCCAG CATTTTGTGG AAGACGCCCA TGGCGATTCG ATCAGCCATG AAGTAGGCCC TGACATCGTC GACCCGCTTC TGCAGAACTC GGTCACCGGG GTATTCAATT TTCGCCTGCG CAACCCGGAC GGCAGTGGCG AAGACGATAA CCCAATGAAA TTGATGGAGG GCCTGGCCCT CTCCGGCGCG GGCAGCGCCA CCGGTCCTGG TGCCGCGCAA ACCACTGTCA GTATCGCCCC GGCACAACCG ACCGTGCAGC CAGTGCCAGA ACCTGCCCCG GCTCCGCAGC CTGAAACCAT CGAGCAACCA TTGCCGGAGC CGATTGTCGA GCCTGTACCT CCGGCACCGG TGCCCCAAGC CAAAAACCGT ACGGTGCTGC TGCTGATTAT CGGTCTGGCA TTGCTCGCCA TCATCGCCGC AGGGCTGTGG TTCTGGCTCA AGAAGCCGCC TGCCCCCGAG CCAACTGCTG CTGCCGCTGC AACGACTCCT GCCGATGTCG CGTCTCCTCC GGCAGCGCCC GCCGCGCCTT GCAGCGTTGA AGCGTTGAAC ACCGAAAACG AGTTGAGCTT CGTACAAGGC TGCATCAAGC AGGCCCCTGA CAGCGCAACA CTGTTGAACG TCATCGGCCT GGCCAAAAGC AACAAGCAAT GCGGTGTCGC CCAGCGGCTC TACGCCAATC GCGCCCAGGC CGGCAACGTC GAAGTGGCTC AGGCCTACGC GCGTGAGTAC GACCCCAAAT ACCTGCAACC CAGCGCCTGT TTCACTGCGC CGGACAATGC CACTGCCGCT TACTGGTATG AAACCATTCT GGGCTATCAG GCAGACAACG CAGAAGCCGT GCAACGCCTG AAGGAGCTCA AGCCGTGA
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Protein sequence | MSITIKLSPL ASPVPGSGFL QVRGWEHDAG NLEFAIQRNQ DDYYLQHNQQ WANAPCWFAQ HFVEDAHGDS ISHEVGPDIV DPLLQNSVTG VFNFRLRNPD GSGEDDNPMK LMEGLALSGA GSATGPGAAQ TTVSIAPAQP TVQPVPEPAP APQPETIEQP LPEPIVEPVP PAPVPQAKNR TVLLLIIGLA LLAIIAAGLW FWLKKPPAPE PTAAAAATTP ADVASPPAAP AAPCSVEALN TENELSFVQG CIKQAPDSAT LLNVIGLAKS NKQCGVAQRL YANRAQAGNV EVAQAYAREY DPKYLQPSAC FTAPDNATAA YWYETILGYQ ADNAEAVQRL KELKP
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