15 homologs were found in PanDaTox collection
for query gene PSPTO_2838 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004578  PSPTO_2838  hypothetical protein  100 
 
 
140 aa  295  1e-79  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0102813  n/a   
 
 
-
 
NC_004578  PSPTO_0779  hypothetical protein  89.92 
 
 
384 aa  251  3e-66  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3716  hypothetical protein  45.38 
 
 
351 aa  120  5e-27  Marinobacter aquaeolei VT8  Bacteria  normal  0.199471  n/a   
 
 
-
 
NC_008740  Maqu_3707  hypothetical protein  44.29 
 
 
154 aa  116  9.999999999999999e-26  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3714  hypothetical protein  43.85 
 
 
388 aa  112  2.0000000000000002e-24  Marinobacter aquaeolei VT8  Bacteria  normal  0.237269  n/a   
 
 
-
 
NC_008740  Maqu_3324  hypothetical protein  44 
 
 
365 aa  90.9  6e-18  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3325  hypothetical protein  43.2 
 
 
365 aa  90.5  8e-18  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3326  hypothetical protein  44 
 
 
361 aa  89.7  1e-17  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3711  hypothetical protein  43.81 
 
 
222 aa  80.9  0.000000000000006  Marinobacter aquaeolei VT8  Bacteria  normal  0.019686  n/a   
 
 
-
 
NC_009654  Mmwyl1_1218  hypothetical protein  36.7 
 
 
351 aa  74.3  0.0000000000005  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_1220  hypothetical protein  31.97 
 
 
363 aa  73.9  0.0000000000006  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_1219  hypothetical protein  36.7 
 
 
363 aa  72.8  0.000000000002  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_0851  hypothetical protein  38.95 
 
 
347 aa  72.8  0.000000000002  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_2831  hypothetical protein  38.14 
 
 
389 aa  65.1  0.0000000003  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2561  hypothetical protein  46 
 
 
90 aa  56.6  0.0000001  Marinobacter aquaeolei VT8  Bacteria  normal  0.363261  n/a   
 
 
-
 
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