| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2824 |
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| Symbol | |
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| ID | 1184478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3148532 |
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| End bp | 3149995 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637394191 |
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| Product | auxin-responsive GH3-related protein |
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| Protein accession | NP_792628 |
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| Protein GI | 28870009 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0537258 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGTCGG CCAATCGCGA CTGCGCGTTT GGCCGTGTCC ACGACTTTGC CGGCATCCGC
AACGCTGGCG ACTTTCGCGA TAAGGTGCCG ATGCACACTT ACGCTCAATT GCAGCCCTGG
ATCGAACGCG CCCAGCACGA AAGCGGCGCG GTGCTGACCA CTCGCCCGCC ATTGTTTTTC
GAGCGCAGCA GCGGCAACAG CGCGTTGCAG AAACTCATCC CCTACACGCC GGAATTTCTT
GCGCAGTTGC AGGGTTCACT GACGGTATGG CTGGCTGATA TGTACCGCCA GGTGCCGGAA
ATCAGCCACG GCAGTGGCTA TTGGTCAATG TCGCCGCCTT TGCAGCAACC GGCGGTGAGC
GCCAATGGCA TCCCGGTGGG CAGTGTCAGC GATCTGCAAT ACCTGCAAGG CAGTGCGATT
GCCGGGCTGG CGGGCACGTT ACTGATTCCC GACTTGGCTC ATGATGTAGT GCACTGGCGC
AGGCAGACAC TGCTGGCCTT GGTTGCCGAC GCCGACCTGA GCTTTATCAG CGTGTGGAGC
CCGACGTTTC TGACCAGCCT GCTGCAACCG CTGTTCGACA CCGAACGGCA GACCTGTGCC
TGGCTCGAAG CGATGCTGCC AGCATCGCGC AAACTGGCCC TGCGCCATGC ACGCGCGCAG
GGCGTCTTCA CCGAGTTATG GCCGCGTCTG GCAGCGGTCA GTTGCTGGAT GGACGGACCG
AGTCATGGGT ACGCCGTGCA ATTGGCGGCG CTTTTTCCTC AGGCGCGCTG GTTGCCAAAA
GGCTTGTTCG CTACCGAAGG CGTGGTCAGT GTGCCGTTTG GCGAAGGGCA GGGCTGTCCA
CTGGCGATTG GCAGTCATTA TCTGGAATTT GTCGGTGACG ACGGGCTGCC GAGAGGCGCT
CGCTCGTTAC GCATGGGCGA AACCGCGCAA GTCTTGCTGA CCACCGGGGC GGGGCTTTAC
CGGTATGTCT TGGGCGATCG GGTGCGCATG GTCGGCAACC ATGCAGGTAC ACCGCGCGTG
GCGTTTGTCG GGCGCAGCGC AAGTGCCTGC GATCTGGTGG GTGAGAAACT GGATGAACAG
CTGGTCGAGG GCGTTCTGGC GCAGTGCATC GACAGTGCAG ACAGCGCCTG CCTGATCCCT
GACTCCAGAA ATACACCGCC GCATTATGTG GCCCTTGTGT CGACATCAGC GGTTACACCC
GGCCAGGTGT TGGCAAACAG CATTGAAACA GTGCTGCAAG GCTCCTTTCA CTATGCCCAT
GCGCGCACGC TGGGCCAGTT GGGGCCATTG CGTGTGCGCT TTGTCAGTGG CGGCGCGCAA
ACACTGGCAG CGCTGCTGCA ACGCGCAGCG GAGGCAACCG GCGTTCGTGC GGGCGACGTC
AAGCCGCGTG CACTGATCAG TCGTCTGGAC ACGGCCAATG CGCTCCTAGC AATCACGGAA
GAATTCGAAT GCCCGCACCT CTGA
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| Protein sequence | MLSANRDCAF GRVHDFAGIR NAGDFRDKVP MHTYAQLQPW IERAQHESGA VLTTRPPLFF
ERSSGNSALQ KLIPYTPEFL AQLQGSLTVW LADMYRQVPE ISHGSGYWSM SPPLQQPAVS
ANGIPVGSVS DLQYLQGSAI AGLAGTLLIP DLAHDVVHWR RQTLLALVAD ADLSFISVWS
PTFLTSLLQP LFDTERQTCA WLEAMLPASR KLALRHARAQ GVFTELWPRL AAVSCWMDGP
SHGYAVQLAA LFPQARWLPK GLFATEGVVS VPFGEGQGCP LAIGSHYLEF VGDDGLPRGA
RSLRMGETAQ VLLTTGAGLY RYVLGDRVRM VGNHAGTPRV AFVGRSASAC DLVGEKLDEQ
LVEGVLAQCI DSADSACLIP DSRNTPPHYV ALVSTSAVTP GQVLANSIET VLQGSFHYAH
ARTLGQLGPL RVRFVSGGAQ TLAALLQRAA EATGVRAGDV KPRALISRLD TANALLAITE
EFECPHL
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