| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2795 |
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| Symbol | |
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| ID | 1184449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3113215 |
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| End bp | 3116310 |
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| Gene Length | 3096 bp |
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| Protein Length | 1031 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637394163 |
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| Product | DNA polymerase III, alpha subunit, putative |
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| Protein accession | NP_792600 |
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| Protein GI | 28869981 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0590978 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACCG AGTACGCCGA ACTGCATTGC CTGTCCAACT TCAGCTTTCA GCGGGGCGCT
TCAAGCGCCC GCGAACTGTT CGACCGCGCC TTGCGTCACG GTTATGCGGC GCTGGCGATC
ACCGATGAAT GTACCCTGGC AGGCATCGTC CGCGCCTGGC AGGCATCAAA AGACACCGGG
TTGCCGCTGA TCGTCGGCAG CGAAATGCAC CTTGAAAACG GCCCGAAAAT CGTCCTGCTG
GTGGAGAACC TGACGGGTTA TCAGGCGCTG TGCACATTGA TCACGGTGGC GCGGCGAAGG
GCCAAAAAAG GTGAGTATCG GCTGCTGCTC GAGGATTTCG ATCACTTGCC GGGCGGCTTG
CTGGCCATCT GGCTGGCCGA CATCGAAGGC GACGCTCAAG CCTGTCTGGC CCAGGGCAAC
TGGTTGCGCG AGCGTTTTGC CGAACGCCTG TGGCTGGGCG TGGAGTTGCA TCGCGGCGCG
GATGACGAGC AGCGTCTGGC CGACCTGCTG GCGTTGGCGC AGTCATTGGC CATTCCAGCA
GTGGCCAGTG GTGATGTGCA CATGCACGCC CGGGGTCGGC GCGCGCTGCA GGACACCATC
ACTGCCATTC GCCACCACAC CACGGTGGCC GAGGCCGGGC ATCTGCTGTT TGCCAACGGC
GAGCGTCACT TGCGTTCGCT GGATGCGTTG GCCGAGCATT ACCCGGACTG GCTGCTGGCC
GAATCGTTGC GCATCGCCCG GCGCTGCACC TTCACGTTCG ATCAATTGCA GTATGAATAT
CCCCACGAGT TGGTGCCCAA GGGGCAGACC TCCACATCAT GGCTACGCGA GCTGACCGAG
CGCGGGATTC GCAGGCGCTG GCCAAGGGGA TTGAGTGTGG CGGCGCGGGC GCAAGTCGAG
AAGGAACTGG CCCTGATCAC GGAAAAGAAG TTCGACAGCT ACTTTCTGAC GGTCCACGAC
ATTGTCGAGT TTGCCCGCAG CCAGCACATC CTCTGTCAGG GTCGTGGGTC GGCAGCCAAC
TCGGCGGTAT GTTACGCGCT GGGGATCACC GAACTGAACC CGGAAAAGAG CAACCTGCTG
TTCGAGCGCT TCATTTCCAA AGAGCGCGAC GAGCCACCGG ACATCGACGT GGATTTCGAA
CATGACCGCC GCGAAGAAGT CATTCAGTAC ATATTCCGGC GTTATGGTCG GGGCAGGGCG
GCGCTGACCG CAGTGGCCAG CACTTATCAC GGTTCCGGCG CACTGCGTGA CGTAGCCAAG
GTGCTGGGCT TGCCGCCTGA CCAGATCAAC GCCCTTGCGG ATGCGTTCAG TCGCTGGAGC
GATTCACTTC CGTCGCCCGA ACGCTTGCGC GAATACGGTT TCGATGCTGA AACACCCATC
CTCAAGCGCG TGCTGGCCCT GACCGGCGAG CTGATCGGTT TCCCCCGGCA CCTGTCGCAG
CATCCGGGTG GTTTCGTGAT TTCCGAGCAT CCGCTGGACA CGCTGGTGCC CGTCGAGAAC
GCGGCGATGG CCGAGCGCAC TATCATCCAG TGGGACAAGG ACGACCTGGA CCTGGTCGGC
CTGCTAAAAG TCGACATCCT CGCACTGGGC ATGCTCAGCG CTTTGCGCAG GACGTTCGAT
CTGGTGCACC TGCACCGGGG CAAGCAGTGG ACATTGGCCA GTCTCCCCGG CGATGATCGA
CCCACCTACG AAATGATCAG CCGCGCCGAC ACCATCGGCG TGTTCCAGAT CGAATCCCGC
GCGCAAATGG CCATGCTGCC GCGCCTCAGG CCGGAAAAGT TTTACGACCT GGTCATCGAA
GTCGCCATCG TCCGCCCCGG ACCGATTCAG GGCGATATGG TTCATCCGTA CCTGCGCCGG
CGTAATAAAG AGGAAGCCAT CACCTATCCG CCCAAACTAA AAAGTGTCTT TGAGCGCACC
CTGGGCGTGC CACTGTTTCA GGAACAGGTC ATGGAAGTGG CGATCATCGC CGCCGATTAC
ACCCCCGGCG AGGCCGACCA GCTGCGCCGC GCGATGGCGG CCTGGAAGCG CCACGGTGGG
CTGGACCCGC ATCGCGAGCG CCTGCGCACC GGCATGCTGG CAAACGGCTA CGATGCGGAT
TTTGCCGATC GGATCTTCGA GCAGATCAAG GGCTTTGGCA GCTACGGCTT TCCTGAGTCA
CATGCCGCCA GTTTTGCTTT GCTGACCTAC GCCAGTTGCT GGCTCAAATG CCATGAACCG
GCAGCCTTTA CCTGCGCACT GATCAACAGC TGGCCGATGG GTTTCTACAG CCCGGATCAG
TTGTTGCAGG ATGCTCGCCG CCATCACATC GAAATTCGCC CGGTGGACGT GCGTTACAGC
CACTGGGATT GCACGCTGGA GCCGCTCGAT CACCCCGACA GCACACGTAA CCTGGCGATT
CGCCTCGGGC TGCGCATGCT GCGCAGCTTT CGCGAAGAAG ACGCCCTGCG CATTGAAGCG
GCGCGCTCGA AGCGGCCATT CGCCGATGCC ACCGACCTGG CTCAGCGCGC CGGGCTGGAC
TCACGCGCTG CCGAGGCGCT GGCGGATTCC GGGGCCTTGC GCGGCCTGAT CGGCCATCGG
CACCGGGCGC GCTGGGAAGT GGCCGGCGTC GAAGCCCAGC GCCCGTTGTT CGATGACGTG
ACCAGCGAAG AAGTCCAGGT GACGCTGCCG TTACCGACAG TGGCCGAAGA TTTGGTGGCT
GACTACGCCA CCCTGGGCAC CACCCTCGGC CCGCACCCGC TGGCTTTACT GCGCCGGCAA
CTGGCTGCCA AACGCTTTCG CAGCTCGCAG GACTTGCTGA GCCTGGAAAA CAACCGGACC
CTCAGCGTCG CGGGGCTGGT CATCGGCCGC CAACGACCGG GCACCGCCAG CGGCGTGACC
TTCGTGACCC TGGAAGACGA ATTCGGCATG GTCAACGTCG TGGTCTGGCG CGACCTGGCC
GAGCGCCAGC GCAAGGTGCT GGTCGGCTCG CAGTTGCTGC AGGTGTTCGG GCGGCTGGAG
TCGAACAACG GCGTACGCCA CCTGATCGCC CAGCGGCTGT ATGACCTGAC GCCGCTGCTG
ACCGGGCTTG AGGTGCGCAG TCGGGATTTT CAGTGA
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| Protein sequence | MNTEYAELHC LSNFSFQRGA SSARELFDRA LRHGYAALAI TDECTLAGIV RAWQASKDTG
LPLIVGSEMH LENGPKIVLL VENLTGYQAL CTLITVARRR AKKGEYRLLL EDFDHLPGGL
LAIWLADIEG DAQACLAQGN WLRERFAERL WLGVELHRGA DDEQRLADLL ALAQSLAIPA
VASGDVHMHA RGRRALQDTI TAIRHHTTVA EAGHLLFANG ERHLRSLDAL AEHYPDWLLA
ESLRIARRCT FTFDQLQYEY PHELVPKGQT STSWLRELTE RGIRRRWPRG LSVAARAQVE
KELALITEKK FDSYFLTVHD IVEFARSQHI LCQGRGSAAN SAVCYALGIT ELNPEKSNLL
FERFISKERD EPPDIDVDFE HDRREEVIQY IFRRYGRGRA ALTAVASTYH GSGALRDVAK
VLGLPPDQIN ALADAFSRWS DSLPSPERLR EYGFDAETPI LKRVLALTGE LIGFPRHLSQ
HPGGFVISEH PLDTLVPVEN AAMAERTIIQ WDKDDLDLVG LLKVDILALG MLSALRRTFD
LVHLHRGKQW TLASLPGDDR PTYEMISRAD TIGVFQIESR AQMAMLPRLR PEKFYDLVIE
VAIVRPGPIQ GDMVHPYLRR RNKEEAITYP PKLKSVFERT LGVPLFQEQV MEVAIIAADY
TPGEADQLRR AMAAWKRHGG LDPHRERLRT GMLANGYDAD FADRIFEQIK GFGSYGFPES
HAASFALLTY ASCWLKCHEP AAFTCALINS WPMGFYSPDQ LLQDARRHHI EIRPVDVRYS
HWDCTLEPLD HPDSTRNLAI RLGLRMLRSF REEDALRIEA ARSKRPFADA TDLAQRAGLD
SRAAEALADS GALRGLIGHR HRARWEVAGV EAQRPLFDDV TSEEVQVTLP LPTVAEDLVA
DYATLGTTLG PHPLALLRRQ LAAKRFRSSQ DLLSLENNRT LSVAGLVIGR QRPGTASGVT
FVTLEDEFGM VNVVVWRDLA ERQRKVLVGS QLLQVFGRLE SNNGVRHLIA QRLYDLTPLL
TGLEVRSRDF Q
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