| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2749 |
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| Symbol | |
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| ID | 1184403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3054534 |
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| End bp | 3056258 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637394118 |
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| Product | hypothetical protein |
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| Protein accession | NP_792555 |
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| Protein GI | 28869936 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0729] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.129008 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTTT TCAGACTATT CAGCAGCCTG TTTCTGATGA CCGTCAGTGC CGCAGCGCTT
GCCCAGGCCC GCCTTGACGT CAGGATCAAG CCCGCCAACC CGGACCTCAA GAGCAACGTC
GAAGGGTATG TGGGCGATCT CGGCGATCGT GATGCCAAGG CGCTGCGCAA TTTCAGTCTG
GGTGCCGAGC AGCAGGCCGA GAAAGCCGCT CAGGCGCTTG GCTACTATCA GGCGCAGATC
GACAGCGAGA TCAAGGACGG TGAAGACCCG CGCCTGATCA TCAATATTCA GCCGGGTGAG
CCCATTCACC TGCGCAATGT GGTCATCCGC GTCGATGGCC CGGCGGCGGC GCTCCAGGCG
TTCAAGGTGC CGAAAAGTGA TGCGCTGAAG ACCGGTGCGG TGCTCAACCA TGGCAACTAC
GAGGACGCCA AGCGCCTGAT CCAGAATCAG GCGTCTCGCT ATGGCTTTTT CAGCGGTCGT
TTCACCCGCC AGCGTCTGGC TATCGACCCG CGAGCCGGGG TTGCCGACAT CGAGCTGGTG
TATGACAGCG GTCTGCGCTA TTCACTGGGC AAAGTCATGT TCAGCGGTAA TACACCGTTC
GATGAAGACC TGCTCAAGCG CATGGTGCCG TTCAAGGAAA ATACCCCTTA CGACTCACAG
ATGATCGCCG AACTGACTCA GGCCATGCAG GCCAGCGGCT ATTTTGAAGG CGTGCGGGTG
GACGCTGCAC CGACTGCCGC CGAGAATCAG GTCATTCCGG TGACGGTCCA GCTGGAAACC
CGCAAGCCCC GCACCATGGG GCTCGGCCTT GGGTATTCCA CCGACGTCGG GCCGCGCGGC
AAGGCCAACT GGACCCGGCA CTGGGCCAAT CCGCAAGGCC ACAGCTACGG CTTCGAATCG
GAGATTTCCG CGCCACGGCA GAACGTCGGG TTGTGGTACG ACGTGCCGCT CGATCCGCCG
CTGACCGATA AGCTGCGTTA CGCAGGCGGT TATCAATATG AAGAGATTGC CGGCACCGAC
AGCCTCAGCA AACTGCTCAC CGCAGGCCCC GAATGGCACA GCAAGCTGCC CAGCGGCTGG
GAACGGGTCA TTTCCCTGAA ATGGCAGCGT GAAGAGTACC GCCTGGGTAA CGACGAGGGC
CTGAGCACGT TATTGATGCC GGGCATCAGC TACTCATACC TGCGCAGTGA CAATCGTATC
GACCCGCATC AGGGCTACCG TCTGCAATTT GACACGCAAG TAGCCAAAGA GGGCATGTTG
TCGGACGCCA ACCTGGTGCA TGCCAATGTG TTGCTCAAAG GCTTGACGAC CGTCGCCCAG
AACCACCGCT TTCTTGGCCG TGTGCAGTTC GGCGGCAACC TCACAGACGG TTACACTTCG
ATTCCACCGT CATTGCGATT TTTTGCCGGT GGCGATCAGA GCGTGCGCGG TTATGACTAC
CAGAAGCTTT CACCGACCAA TTCCGATGGC GACCGCATTG GCGGGCGTTA CATGTTTGCC
GGGAGCGTCG AGTACCAGTA TTCGATTGCC GAAAAGTGGC GACTGGCGAC GTTTGTCGAT
CAAGGCAACT CGTTCAACAC TCTGGACAAA CCGGACCTTA AGACAGGGGT CGGTTTCGGC
GTGCGCTGGG TATCACCGGT AGGCCCGCTG CGTCTCGATC TGGCCCATGC GCTGGACGAT
GATGGCGGCA TTCGCCTGCA CTTCTCGATG GGGCCGGAAC TGTGA
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| Protein sequence | MKLFRLFSSL FLMTVSAAAL AQARLDVRIK PANPDLKSNV EGYVGDLGDR DAKALRNFSL
GAEQQAEKAA QALGYYQAQI DSEIKDGEDP RLIINIQPGE PIHLRNVVIR VDGPAAALQA
FKVPKSDALK TGAVLNHGNY EDAKRLIQNQ ASRYGFFSGR FTRQRLAIDP RAGVADIELV
YDSGLRYSLG KVMFSGNTPF DEDLLKRMVP FKENTPYDSQ MIAELTQAMQ ASGYFEGVRV
DAAPTAAENQ VIPVTVQLET RKPRTMGLGL GYSTDVGPRG KANWTRHWAN PQGHSYGFES
EISAPRQNVG LWYDVPLDPP LTDKLRYAGG YQYEEIAGTD SLSKLLTAGP EWHSKLPSGW
ERVISLKWQR EEYRLGNDEG LSTLLMPGIS YSYLRSDNRI DPHQGYRLQF DTQVAKEGML
SDANLVHANV LLKGLTTVAQ NHRFLGRVQF GGNLTDGYTS IPPSLRFFAG GDQSVRGYDY
QKLSPTNSDG DRIGGRYMFA GSVEYQYSIA EKWRLATFVD QGNSFNTLDK PDLKTGVGFG
VRWVSPVGPL RLDLAHALDD DGGIRLHFSM GPEL
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