| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2731 |
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| Symbol | |
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| ID | 1184385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3029769 |
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| End bp | 3030842 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637394100 |
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| Product | periplasmic sugar-binding domain protein |
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| Protein accession | NP_792537 |
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| Protein GI | 28869918 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.223231 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGGTTG GCTGTGTGTG GGCCGGATCC GCATTCGCCG CCTCTGTGGT ATTTCTCAGC
CCCGGTACTG AAACCGACGG CTATTGGCAG AGCCATGCCC GGGTGATGCA GACGGCTGCC
AATACCACCG GCATGTCGCT GAAAATACTG TATACGGACC GCGATACCCG CAAGTTGCTC
GCCTTGGCGC GCGAAACGCT GCAGGGCTAC GTGCGTCCGG ATTACCTGAT GTTCTCCAAT
GAGCTGAACG TTGCCCCGGA AATCCTGCGC ATGTCGACGG GCAGCGGGGT CAAGCTGTTT
GCGGTGAACA ACACGCTGAC GGCGGATCAG ATCCGTATTC TGGGTGATCT GCCAACGCGC
TACCCGGATT TCATCGGCAG TCTGGTCGGC AACGATGAGG AGGGCGGCTA TCTGACGGCT
AAGCGACTTA TCAGCCTGGT TCTTCCGGTT GCCGAGGGGC AGGTTGTCGA CATGCTGGCG
TTCTCAGGCA CCAACACCAC ACCGGTTTCC CTGCAGCGTG AAAAAGGCAT GTTGCGTGCG
CTGTCCGAAC ACCCTGAGGT GCACCTGCGG CAGATCGCGC TGGGTGGATG GCGTCGGGAT
CGAGCGGTCG AGCAGGCCCG CGTGCTGTTC AGGCGCTACC CGCAGACGCG CCTGGTGTGG
GCGGCCAACG AGCAAATGGC GTTTGGTGCA ATGGATGCCC TGCGGGAAAA AGGCGGCAAA
CCTGGCGAGG ACGTGTTGTT CAGCGCCATC AACGGCACGG CTCTGTCGTT GCAGGCACAA
CTCCATGGCA GCCTGAGCGC AGTGGCTACC GGGCATTTTA CCTTGGGTGG GTGGGCGATC
ATTCTGTTGC ATCGCTACGA AACGGCGCAA GAGCAGCCCC GCCAGCAAGT CGGCGCGCGG
ACCATTGACG TGCTGCACGT GGTCGAGCCA CAAGACACAC AGCGATTTCT CGACGCGACC
CGCGATGAGC GCTACAGGCT TGATACCCAG GCGTTCAACG TGGGTGTTTT TGGCGAAGAG
TCGCCGTTTT CGTTGAAAAG CATGTTGCCG CCTGTAGGGC CAGACGGCAA ATAG
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| Protein sequence | MVVGCVWAGS AFAASVVFLS PGTETDGYWQ SHARVMQTAA NTTGMSLKIL YTDRDTRKLL
ALARETLQGY VRPDYLMFSN ELNVAPEILR MSTGSGVKLF AVNNTLTADQ IRILGDLPTR
YPDFIGSLVG NDEEGGYLTA KRLISLVLPV AEGQVVDMLA FSGTNTTPVS LQREKGMLRA
LSEHPEVHLR QIALGGWRRD RAVEQARVLF RRYPQTRLVW AANEQMAFGA MDALREKGGK
PGEDVLFSAI NGTALSLQAQ LHGSLSAVAT GHFTLGGWAI ILLHRYETAQ EQPRQQVGAR
TIDVLHVVEP QDTQRFLDAT RDERYRLDTQ AFNVGVFGEE SPFSLKSMLP PVGPDGK
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