Gene PSPTO_2700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2700 
Symbol 
ID1184354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp2994802 
End bp2995356 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content57% 
IMG OID637394070 
Producthypothetical protein 
Protein accessionNP_792507 
Protein GI28869888 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.000174469 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTATTG GCACGAGTGC GCTTGAACAG CTTGTTTCCC GGGCTGTGGT TGGGCACAAG 
ACCGTCGATG AGGTGTCCCA GGACGCTTTC AGCGCGGTCG CCGCCGCTGG CCTGAATTCA 
GGCACGGCAC CGGTCGTTGC GCAAACCAGC AATTCGACAT CGCAGGACAG CAAGCAGGAC 
AACAGCGGTT ACAACGAATC CTTTGCACGG ATGATGATCA ACCTCAAGTC TGCCGGTGAT 
ACGTCACTGT CGGAAAAGAC GGCTGATCGC GACAACGGCG TCATCGGTTC AGTGGCTAAC 
ACCACCAGCG CCAACGATGT CGCATCGACG GGTTCGGCAG AACAGAAATT CATGGACTCT 
CTGAAGCAGA CAGCCGAAGA GAAAGTGCGC GAGAAGCTGA CAGGCGTCAG CCAGAAAGAC 
TACGACGCCA TGGCACCTCA GGACCAACTG GCAATCGACC AGAAAGTCCA GGACGCGCTC 
AAGGACAAAC AGAACGATGT GGCGGATGAC ATCAACACGC GCATCAGGGG TATCAAGGCC 
GGAATGGTGG CCTGA
 
Protein sequence
MIIGTSALEQ LVSRAVVGHK TVDEVSQDAF SAVAAAGLNS GTAPVVAQTS NSTSQDSKQD 
NSGYNESFAR MMINLKSAGD TSLSEKTADR DNGVIGSVAN TTSANDVAST GSAEQKFMDS 
LKQTAEEKVR EKLTGVSQKD YDAMAPQDQL AIDQKVQDAL KDKQNDVADD INTRIRGIKA 
GMVA