Gene PSPTO_2672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2672 
Symbol 
ID1184324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp2967912 
End bp2968397 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content59% 
IMG OID637394040 
ProductNAD(P)H-flavin oxidoreductase 
Protein accessionNP_792479 
Protein GI28869860 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.058171 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGAAC CCAGTATCTA TAAAGAAGTC ATGGCGTCAT TCCCGTCGGG CGTGACGATA 
GTCACCACGC TGGACCCTGA AGGCAATCTG GTCGGCATCA CCGCCAGTGC CTTCAGCGCG
CTGTCCATTG ACCCGGCGCT GGTGCTGTTC TGCCCCAATT ACGCCTCCGA CACCTACCCG
GTGCTGCGTG ACAGCAAGAA GTTTGCCATT CACCTGTTGT CTGCCGACCA GCAGGTCGAA
GCCTATGCGT TCGCCAGCAA AGGCAAGGAC AAGACCAAAG GCATCGAGTG GCACCTGAGC
GAGCTGGGCA ACCCGCTGCT GGGCAAGGCA ACCGCGATCA TCGAGTGCGA GCTGTGGCGC
GAATACGACG GCGGCGATCA TGCAATTATC GTCGGCGCGG TGAAAAACCT GATTCTGCCC
GCCATTCCCG TGACGCCGAT GATTTATCAC CGGGGCAAGA TGGGGGCACT GGCGCCGATC
GTCTGA
 
Protein sequence
MIEPSIYKEV MASFPSGVTI VTTLDPEGNL VGITASAFSA LSIDPALVLF CPNYASDTYP 
VLRDSKKFAI HLLSADQQVE AYAFASKGKD KTKGIEWHLS ELGNPLLGKA TAIIECELWR
EYDGGDHAII VGAVKNLILP AIPVTPMIYH RGKMGALAPI V