Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2594 |
Symbol | nfxB |
ID | 1184246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2867950 |
End bp | 2868504 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637393964 |
Product | transcriptional regulatory protein NfxB |
Protein accession | NP_792403 |
Protein GI | 28869784 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGTAC CTGCTGACGA AAAACTCCTG AAAGCGCTGG CCGTTGCGCT GGTCGACCAC TCCACCGGCA CCTTTAAGGA CATCGCCGAA GCGGCGGGGG TGAGCAAGGC CACGCTCAAT CGCTTCTGCG GCACCCGCGC CAACCTGATC GAGATCCTGC TCATCCACGC TTCCGAGCTG ATGAACAAAA TGATTGCCGA CGCCGATCTG CAGAACGCGC CACCGCTTGA GGCGCTGCAA CGTCTGATCG ACAACCACCT GACCCATCGT GAAATGCTGG TATTTCTGGT TTTTCAATGG CGTCCGGACA CCATGGACGA AAGCTGCGGT GGCCTGCGCT GGCTGCCCTA TTCAGACGCT CTGGATGCGT TTTTTCTGCG CGGCCAGCGT GAAGGCCTGT TCCGTATCGA CATCAGCGCC CCGGTACTGA CCGAAACCTT CGCTTCCCTG CTGTTCGGGC TGGTCGATGC AGAACGCCGG GGCCGCGTTG CGCGCACGGG AATGGATGCC GTGTTGCTGC AGATGTTCAT GCAGGGCGCG CGAAGCGGTG CGTGA
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Protein sequence | MDVPADEKLL KALAVALVDH STGTFKDIAE AAGVSKATLN RFCGTRANLI EILLIHASEL MNKMIADADL QNAPPLEALQ RLIDNHLTHR EMLVFLVFQW RPDTMDESCG GLRWLPYSDA LDAFFLRGQR EGLFRIDISA PVLTETFASL LFGLVDAERR GRVARTGMDA VLLQMFMQGA RSGA
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