Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2578 |
Symbol | |
ID | 1184230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2847956 |
End bp | 2848861 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637393949 |
Product | hypothetical protein |
Protein accession | NP_792388 |
Protein GI | 28869769 |
COG category | [S] Function unknown |
COG ID | [COG1469] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.176733 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAGCC CCCTCCCAGA CGTTGCCCTG ACGGAAGTGT CCTCGGCCCT GATTGCACTC GACTGGGTCG GCATGCAAGG CGTCGAAGTG CCGCTGACGC TGGGCGAGCA GGGTGCCACC CACCCGGTTC ATGCCTACGC AGACCTGCAG GTCGATCTGA CTGACCCCAG CGTCAAGGGC ATCCACATGT CGCGGCTTTA CCGGCTGCTT GACGGTTTTG CCGAACATCA GGTGCTCACG CCCGAGACGT TATCTGCGCT GCTGGAGGCG ATGGTCGAGA GCCATGTCGA TTGTCACTCC AGCGGCGCCC GCATCACGCT GACCTTCAAC CTGTTGTGCC GCCGTCCGGC GCTGGTTACC GAAGGGCTCA GCGGCTGGAA GTCCTATCCG GTCAAGCTTG AGGCCGTCTG GCGGGCGGGG CGTTTGTGCC TCGACGTCTC TGCCGATATC ACTTACTCGT CCACTTGCCC ATGCTCGGCG GCACTGTCCC GACAACTGTT GGAAGAAGCG TTTGTCGCCC GTTTTGGCCG CCAGTCGTTC GTTGACCCCA TGCAGGTCGC GGCCTGGCTG CGCGAGAACG CCTCGTATGC CACGCCGCAC AGCCAGCGCA GTGTGGCGAC GGTGCAGGTG CGCGTGGCGG AGCAGGCCAC CGAAATGGGC CTGATGGCGC TGATCGATAC GGTCGAACAG GCGCTGGGCA CGCCGGTGCA GACCGCCGTC AAGCGTGCCG ACGAGCAAGC CTTTGCCAGG CTCAACGGCC AGAACCTGAT GTACGTCGAA GACGCCGCGC GCAAGATCCA GCAGGCGCTT GAGGGCCGCT ACCCAGCCTC CAGCGTCAGC GTGCGTCACT TCGAGAGCCT GCATCCTCAT GATGCAGCCG CGCAGACTTC CAGCTACCTG TCCTGA
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Protein sequence | MNSPLPDVAL TEVSSALIAL DWVGMQGVEV PLTLGEQGAT HPVHAYADLQ VDLTDPSVKG IHMSRLYRLL DGFAEHQVLT PETLSALLEA MVESHVDCHS SGARITLTFN LLCRRPALVT EGLSGWKSYP VKLEAVWRAG RLCLDVSADI TYSSTCPCSA ALSRQLLEEA FVARFGRQSF VDPMQVAAWL RENASYATPH SQRSVATVQV RVAEQATEMG LMALIDTVEQ ALGTPVQTAV KRADEQAFAR LNGQNLMYVE DAARKIQQAL EGRYPASSVS VRHFESLHPH DAAAQTSSYL S
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