| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2575 |
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| Symbol | |
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| ID | 1184227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2844126 |
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| End bp | 2845043 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637393946 |
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| Product | peptide ABC transporter, permease protein |
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| Protein accession | NP_792385 |
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| Protein GI | 28869766 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGGAT TTCTCTTGCG CCGCCTGGGC ATTGCCTTGT GCGTAGCGAT TACCGTGTCG
GTGATCAGCT TTTCCCTGTT GCACCTGTCC GGCGACCTGG CCACGGCCAT CGGCGGGCCG
GAAGCCAGCA GCGAGCAGAT TGAACAGATC CGTGTGCAAT ACGGCCTCAA CAAGCCGTTG
GTCACGCAGT ATTTCGAATG GCTGGCCGAC GTGGTGCGCC TTGATTTTGG CGACTCGTTC
TTCTTTCAGG AGTCGGTCTA CAACCTGATC GCCTCGCGCC TGTCGATCAC CCTCGGGCTG
GGCGCAATGG CCCTGAGCAT TGCGCTGCTG ATCGCCATTC CGCTGGGCGT GCTGGCAGCG
GTGAAACGTG ACACCTGGGT TGACCGGCTG GCGCTGAGCA TCGCGGTGCT GGGCCAGGCG
ATGCCGAGTT TCTGGTTCGC GCTGATGCTG ATCGTGGTGT TCTCGGTCAC CCTGAAATGG
CTGCCGGTGT CAGGCAACTC GACCTGGGCG CACTTCGTCA TGCCGGCGAT TGCGCTGGGT
TATTACGCCA CCCCGGCGAT CATGCGCCTG ACCCGTGCCG GCATGCTCGA CGTGCTCAAT
TCCGATTACA TCCGCACCGC TCGCGCCAAG GGCCTGCGCC CCGCCACCGT GCTGTTCAAG
CATGCGCTGC GCAACGCGCT GATTCCGGTG GTGGCACTGG CTGCCGTGGA GTTCGGCTTC
ATGCTCGGCG GTTCGGTGGT CATTGAAACG GTTTTTTCGC TGCAAGGCAT CGGCCAACTG
GCCTGGGACG CGATTGCCCG TGACGACTTT CCAGTGGTGC AGGCGGTGGT GCTGTTGATC
GCGGTCATCT ACATCGTCCT CACGCTGCTG GCCGACGTGC TCAACGCACT GCTCGACCCA
CGCATCCGCG TGAAATAG
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| Protein sequence | MFGFLLRRLG IALCVAITVS VISFSLLHLS GDLATAIGGP EASSEQIEQI RVQYGLNKPL
VTQYFEWLAD VVRLDFGDSF FFQESVYNLI ASRLSITLGL GAMALSIALL IAIPLGVLAA
VKRDTWVDRL ALSIAVLGQA MPSFWFALML IVVFSVTLKW LPVSGNSTWA HFVMPAIALG
YYATPAIMRL TRAGMLDVLN SDYIRTARAK GLRPATVLFK HALRNALIPV VALAAVEFGF
MLGGSVVIET VFSLQGIGQL AWDAIARDDF PVVQAVVLLI AVIYIVLTLL ADVLNALLDP
RIRVK
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