Gene PSPTO_2573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2573 
Symbol 
ID1184225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp2842191 
End bp2843192 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content64% 
IMG OID637393944 
Productpeptide ABC transporter, ATP-binding protein 
Protein accessionNP_792383 
Protein GI28869764 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.194756 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCTGT TGCATGTTGA AAACCTGCGT GTCGAGATCC CGCTCGGGCA AGACACGCTC 
CACGCAGTGC GCGGCCTTGA CTTTGAAGTC GAGCGCGGCG AAATGCTGTG CATAGTCGGC 
GAATCGGGCT GCGGCAAATC CCTGACCTCG CTGGCGCTCA TGGACCTGCT GCCGCGCAAG 
GCCCGGCGTA CCGCGACCAC GCTGAGCCTG GACGGCATCG ACATGCTGAC CCAGAGCGAA 
CGGCAAATGT GCGACCTGCG CGGCAATCGT CTGGCGATGA TCTTTCAGGA ACCCATGACC 
TCGCTCAACC CGGCATACAG CATCGGCGAT CAGCTCAGCG AAGTGCTGAC CCGGCATCGC 
AAGGTGTCAC GCAAGGAAGC CCTGCAGCGT GCAGCGCAGA TGTTGGAGAA AGTCGGCATC 
AGCAACGCCA GCGAGCGCCT GCGCCAATAC CCGCACCAGT TGTCGGGCGG CCTGCGTCAG 
CGGGTGATCA TCGCCATGGC GCTGATGTGC GAACCGGACG TGATCATTGC CGACGAGCCC 
ACCACCGCGC TGGACGTGAC CATTCAGGCG CAGATCCTGC GCCTGATCCG CGACATCCAG 
AAAGAGTTCG GTCTGGCGGT GATTTTCATC ACCCACGATT TGGGGCTGGT GGCGCGGATT 
GCCGACCGGG TGGCGGTGAT GTACGCCGGG CAAATCGTCG AAACCGCCCC GGCTGTCGAG 
CTGTTCGAGA ACCCGCAGCA CCCGTACACG CGCGGCCTGC TGGCGAGCAT CCCGATCCCC 
GGACGCACCC AGCCAGGCCA GCCGTTGGGT TCGATTCCAG GGTTAGTGCC CAGCCTGGTT 
GGCGAGCAAC ACGGCTGCGC CTTCCGCAAC CGCTGTCCGC AGGCCATCGC GGCGTGCGCC 
GAAGATGTCC CTCAGGTTCA CAGCCATAAC CACATGACCC GCTGCCTGTT TGCTTCAGTG 
GGCGCAGAAC CTGTGTTGCA GCGTGAGGGC ATGAAGTCAT GA
 
Protein sequence
MALLHVENLR VEIPLGQDTL HAVRGLDFEV ERGEMLCIVG ESGCGKSLTS LALMDLLPRK 
ARRTATTLSL DGIDMLTQSE RQMCDLRGNR LAMIFQEPMT SLNPAYSIGD QLSEVLTRHR 
KVSRKEALQR AAQMLEKVGI SNASERLRQY PHQLSGGLRQ RVIIAMALMC EPDVIIADEP 
TTALDVTIQA QILRLIRDIQ KEFGLAVIFI THDLGLVARI ADRVAVMYAG QIVETAPAVE 
LFENPQHPYT RGLLASIPIP GRTQPGQPLG SIPGLVPSLV GEQHGCAFRN RCPQAIAACA 
EDVPQVHSHN HMTRCLFASV GAEPVLQREG MKS