| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2570 |
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| Symbol | |
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| ID | 1184222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2838609 |
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| End bp | 2839760 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637393941 |
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| Product | peptidase, M20/M25/M40 family |
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| Protein accession | NP_792380 |
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| Protein GI | 28869761 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.27383 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGAGG CACAACGGCA GGCAACCGAC TGGCTGAGCG GACAGTTTGA AGCGATGGAA
GCGCTGTTGC AGCGCCTCGT CGATACCGAC TCCAACAGCT ACGACAAGGC CGGTGTCGAT
GCGGTCGGCG ATCTGCTCAC TGCGCACTTG AAGGCCGACG GGATCAGCGT CGAGCGCATC
CCGGTCGAGG CTTTCGGCGA TGTGCTGTTG GCTGAACTGC CCGGCGGCCC CGGCAAGCCG
GTATTGCTAC TCGGTCATCG CGACACGGTG TTCCCGAAAG GCACGACCGC TATACGCGGC
TACACGAACG ACAGCGAACT GGCCTATGGC CCTGGCGTGG CCGACATGAA AGGCGGGCTG
GTGCTCAACT GCTTTGCCCT TAAGGCACTG AAACGAATCG GCCCGCTGCC GTTTCCGGTG
CAGACTCTGT ACACCGGCGA CGAAGAAATC GGCTCCGCCA GCGCCCGTGT TCACATCGAA
AAATACGCCC GTCAGGCGCG CGCGGTACTC AACCCGGAGC CAGGACGCGC CAGCGGCAAC
GTGGTCAGCG CTCGCAAAGG CGGTGCAACG CTGATCATCG AAGTCAGCGG CCGCGCGGCG
CATTCGGGGG TCAACCACGC CGACGGCGCC AGCGCGATTC AGGCCCTGGC GCACAAAGTG
ATCAAACTGC ACGCGCTGAC AGATTATGCC GCGGGCATCA CCACCAATGT CGGACTGATC
TCGGGCGGCA CCTCCAGCAA TACCGTTGCA CCCAGCGCCA CGGCCAGGCT TGATGTGCGC
TTTGTCGAGC TCAGGCAGTG GGATGAAATT CTCACGGCGG TCCAGACCAT CGTCGCCGAA
GAGGAACTGC CCGGCACATC CGCCAGGCTG CTGGAAGCCA CCACCTTTCT GCCGATGGAA
GCCCGGCACA GCACCGAACT GCTGAATATC TATCAGGGCC TCGCGCTGGA ACTGGGTTTC
AGCGTGGAAG GCGAATTCAC CGGCGGCTGC GCCGACTCGG GCTTCACCGC CAGCCTCGGC
ATCCCGACCC TGTGCGGCCT CGGCCCGGTG GGCGGCAAAG TGCACACCGA CCGTGAGTAT
CTGGAGCTGA ACACATTGGT GCCCAGAGGT CAGGCGCTGG TGGCGACGAT ACTGGCGTTG
GGGGATTTTT GA
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| Protein sequence | MNEAQRQATD WLSGQFEAME ALLQRLVDTD SNSYDKAGVD AVGDLLTAHL KADGISVERI
PVEAFGDVLL AELPGGPGKP VLLLGHRDTV FPKGTTAIRG YTNDSELAYG PGVADMKGGL
VLNCFALKAL KRIGPLPFPV QTLYTGDEEI GSASARVHIE KYARQARAVL NPEPGRASGN
VVSARKGGAT LIIEVSGRAA HSGVNHADGA SAIQALAHKV IKLHALTDYA AGITTNVGLI
SGGTSSNTVA PSATARLDVR FVELRQWDEI LTAVQTIVAE EELPGTSARL LEATTFLPME
ARHSTELLNI YQGLALELGF SVEGEFTGGC ADSGFTASLG IPTLCGLGPV GGKVHTDREY
LELNTLVPRG QALVATILAL GDF
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