| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2505 |
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| Symbol | |
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| ID | 1184157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2767470 |
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| End bp | 2768303 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637393878 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | NP_792317 |
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| Protein GI | 28869698 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.470919 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAGCA TCCACCCCGA AAACTCGACC GCGACACCTT TATTCTGGCG CGACGAGCAG
TTGCCGTTCA TTGAGGCGCG CTCGGTAGAA GACGGCCGGC GGGTCTGTTA TGCACCGCAT
TCACACGAGA TCTTTTCCAT CGGTGCAATT ACCGCCGGGC AAAGCACTTA TCTGCACGAA
AAGACTGCAC AGCGCGTCGC GGCGGGCACT GTGGTGCTGA TGAACCCCGG CGATGTGCAC
GCCTGCAACC CGATCAACGA CCAGCCGTGG TCGTACCTGA TGCTTTATGT GGACAGCCAC
TGGCTGAGCG ATATTCAGCA CGACGCCGGG CTGGATGCTA AATACGGATT TCAGCCCCTG
TCGCACACCC GCAGCAATAA CCCGGTGCTG TTCGGCGCAG TGACAGCGCT GTACCAGACG
CTGATCGATG CCAAGGCCGA CACCCTGCAA AAACACTGCG CCGCCGTATC GTTCTTCACG
CTGATGCTGG AAACACTGGG CGATGCACCA GCACTTGCCC GCCGACCTTC CCCGCGAGTC
ACCCGCGCCG CCGACTACAT CAACGACAAC TTCACCCAGC CTATCAAGCT CGCCGATATC
TGTTCAGCAG CCAACCTCTC GGCGTCGTAT CTGATTCGCT CGTTCGAGCA GCACTACCAC
CTGACGCCCC ACGCCTACCT GCTCAATCGC CGCATCCAGC ACGCACAAAC CCAGTTGAAA
AGCGGCAAGA TGATTGCCGA CGTTGCACAG GAAACAGGCT TTGCCGATCA GGCACATCTT
CAACGCGAGT TCAAAAAGCA CCTGGCTGCA ACGCCAGGAC AGTATCGGTT GTGA
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| Protein sequence | MNSIHPENST ATPLFWRDEQ LPFIEARSVE DGRRVCYAPH SHEIFSIGAI TAGQSTYLHE
KTAQRVAAGT VVLMNPGDVH ACNPINDQPW SYLMLYVDSH WLSDIQHDAG LDAKYGFQPL
SHTRSNNPVL FGAVTALYQT LIDAKADTLQ KHCAAVSFFT LMLETLGDAP ALARRPSPRV
TRAADYINDN FTQPIKLADI CSAANLSASY LIRSFEQHYH LTPHAYLLNR RIQHAQTQLK
SGKMIADVAQ ETGFADQAHL QREFKKHLAA TPGQYRL
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