| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2418 |
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| Symbol | |
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| ID | 1184070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2665900 |
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| End bp | 2667081 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637393793 |
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| Product | branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein |
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| Protein accession | NP_792232 |
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| Protein GI | 28869613 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | [TIGR03407] urea ABC transporter, urea binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACAACG ACAAACGCCG TTTGATCAAG CATGCTCTGT TGCTGGGCGC GATCAGCCTG
CTGCCGTTTT CCCTGATCAG TCAGGCGCAG GCGGCCGACG CTGTGAAGGT CGGGATAATC
CACTCGCTGA CCGGCACCAT GGCGATCAGC GAAGCCTCGG TGGTCGACGC CGAAAAGCTC
GCCATCGAGG AGATCAACGC CAGCGGCGGT GTGATGGGTA AAACCATCGA GCCGATCATC
GAGGACGGTG CCAGCGACTG GCCAACCTTC GCCGAAAAAG CGCGCAAACT GTTGGAAAAC
GATCACGTTG CGGTGACCTT TGGCGCCTTC ACCTCGGCGT CGCGCAAAGC GGTGCTGCCG
GTCTTCGAGC GCAACAAGGG CCTGCTCTAC TACCCGACCT TCTATGAAGG CCTGGAAAAA
TCCCCGGCCA TTATCTACAC CGGCGCGGAA GCCTCGCAGC AAACCCTGGC AGCCGTGAGC
TGGCTGATGG CCAACAAAGG CAAAAGCGTC TATCTGGTCG GCTCCGACTA TATCTGGCCG
CGCACCACCA ACAAGCTGGC GCGCGCCTCG GTGACGAAAC AGGGCGGCTC GATCGTCGGT
GAAGATTACC TGCCGCTGGG GGCTATCGAA TTCTCCTCGG TGATCAACAA GATCAAGGTC
GCCAAACCGG ACATCGTGCT GTCGACCGTC GTCGGCGGCT CCAACGTCGC ATTCTACAAA
CAGCTCAAGG CTGCCGGGAT CGACAGCAGT AATCAGACGC TGATGGCGCT GGCCGTTACC
GAGGAAGAGG TCACCGGCAT CGGTGCGGAA AACCTGGTCG GCTTCCTGAC CTGCATGAGC
TACTTCCAGA GCCTGAAAAA CCCGGTCAAC GAGAAATTCG TGCAGGCCTT CAAAACGCGC
TACGGCCAGC AGCGCGTGGT CGGCGACCCG ATGGCAGCAG CCTACACAGC CGTGTACCTG
TGGAAGAAGG CGGTCGAGAA AGCCGGCAGC TTTGAGGTAC CGGCCGTCAT TGCCGCGTCC
TCGGAACTGA CCCTTGACGC CCCCGAAGGC GAGATCAAGG TGCACAAGGA CAACCATCAC
CTTTGGAAAC GCGCGCGCAT CGGCACGCTC AATGCGCAGG GCCAGGTGGA CGTGATCTAC
GAGTCCGCGC CCATCGAGCC CAACCCGTTT CCGAAACTCT GA
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| Protein sequence | MHNDKRRLIK HALLLGAISL LPFSLISQAQ AADAVKVGII HSLTGTMAIS EASVVDAEKL
AIEEINASGG VMGKTIEPII EDGASDWPTF AEKARKLLEN DHVAVTFGAF TSASRKAVLP
VFERNKGLLY YPTFYEGLEK SPAIIYTGAE ASQQTLAAVS WLMANKGKSV YLVGSDYIWP
RTTNKLARAS VTKQGGSIVG EDYLPLGAIE FSSVINKIKV AKPDIVLSTV VGGSNVAFYK
QLKAAGIDSS NQTLMALAVT EEEVTGIGAE NLVGFLTCMS YFQSLKNPVN EKFVQAFKTR
YGQQRVVGDP MAAAYTAVYL WKKAVEKAGS FEVPAVIAAS SELTLDAPEG EIKVHKDNHH
LWKRARIGTL NAQGQVDVIY ESAPIEPNPF PKL
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