| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2349 |
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| Symbol | |
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| ID | 1184000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2604859 |
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| End bp | 2605749 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | |
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| Product | RNA pseudouridine synthase family protein |
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| Protein accession | YP_001740051 |
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| Protein GI | 170660221 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.189292 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGAGT CCGTTTTCAG TGCCGCACAG CAACAAGCCA GCACCTTGTA CCTGCCGCCG
GGTCCGTGGG CGACTGTGCT CGATTGCCTG TGCGCGAAAT TCACGGCCAT CAGCCGTGAA
CAGTGGCTGG ACCGTATCGC CCGTGACCGG GTGCTGGATG CCGACGGAAA AACCATTACG
CCGGACATGG CCTATCGCGA AGGGCTGAAG ATTCATTACT TTCGTGAAGT GCCCAATGAA
ACGCCGATCC CGGTGGTCGA GACCATTCTC TATGCCGACG AACACCTTGT CGTCGCCGAC
AAGCCGCACT TTCTTCCCGT GACACCGGCT GGCGAATACG TCGAACAGAC CTTGTTACGC
CGCCTGATCC ATCGCCTCGA CAACCCCGAT CTGGTGCCGT TGCACCGTAT CGACCGGCAC
ACCGCAGGGC TGGTGCTGTT TTCAGCCAAC CGGCAGACCC GCTCGGCTTA TCAGACACTG
TTCCCCACCC GGCGTATCGA CAAATGCTAC GAAGCCATTG CACCAGCGCT GCCTGGACTT
GAGTTTCCGC GCCTGCACGA GAGCCGTCTG GTGGAGGGCG AGCCGTTTTT TCGCATGCAG
GAAGGGCCGG GCGTCAGCAA CACGCAGACG CGCATCGAAG TGCTGGAGCG GCACGGGCCA
TTATGGCGTT ACGGGCTGCA CCCGGTGACG GGCAAGAAGC ATCAGTTGCG CGTGCACATG
GCGGCGCTGG GCGCTGCGAT CTGCAATGAC CCGTTCTACC CTGATGCCCT GAAGGATCCG
GTGGACGACT ACCGGCACCC ATTGAAATTG CTCGCCAAAA GCCTGCGCTT CACCGATCCG
CTCAGCGGCG AACCGCGTCA GTTCGAGAGC CTGCTCACGC TGGAGTGGTA A
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| Protein sequence | MSESVFSAAQ QQASTLYLPP GPWATVLDCL CAKFTAISRE QWLDRIARDR VLDADGKTIT
PDMAYREGLK IHYFREVPNE TPIPVVETIL YADEHLVVAD KPHFLPVTPA GEYVEQTLLR
RLIHRLDNPD LVPLHRIDRH TAGLVLFSAN RQTRSAYQTL FPTRRIDKCY EAIAPALPGL
EFPRLHESRL VEGEPFFRMQ EGPGVSNTQT RIEVLERHGP LWRYGLHPVT GKKHQLRVHM
AALGAAICND PFYPDALKDP VDDYRHPLKL LAKSLRFTDP LSGEPRQFES LLTLEW
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