| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2337 |
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| Symbol | pcaQ |
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| ID | 1183988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2590640 |
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| End bp | 2591569 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637393714 |
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| Product | pca operon transcriptional activator PcaQ |
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| Protein accession | NP_792154 |
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| Protein GI | 28869535 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | [TIGR02424] pca operon transcription factor PcaQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.269299 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAATATCG ACACCCGCAT CAAATTTCGC CATCTGGTGT GCTTTCTGGA AGTGGCACGG
CAGGGCAGTC TGGCGCGGGC CTCCGATGCG CTGGCGATCA GTCAGCCTGC CTTGTCCAAA
AGCCTCAAGG AGCTGGAAAC CCTGCTGGCC ACGACCTTGT TCGTGCGCAG CAAGAGCGGT
GCGGCGCTGA CCGACGCGGG CGTGGCGTTC ATGCGTTTCG CCGGGCCTAG CGTCCAGGCG
TTGCGCGACG GGGTCAGCAG CCTACGCTCC GGCGAGCATG AAACCGTTAC GGCGCGGCTG
GGCGTGCTGT CCACCGCCGA AAGCCTGCTG GTGCCAGAGG TCGTCAAGCG CCTGCACACG
CGCCACCCGG CGTTGATCGT CAGTGTGATG ACTGGCCCCA GCGCCTATCT GCTCTCGCAA
TTGCGTGTCG GCGAGCTGGA CCTGGTGGTC GGGCGCATGA CCGACAGCCC GCAGATTCAG
GGGCTTACTT TCGAGCACTT GTACCACGAG TCAATGACGC TGGTGGTGCG CAATGACCAT
CCGCTGCTGG CTGCGCCGCT CAAGCGTGAA AGCCTGGAGC AGTTCCCGCT GGTGCTGCCG
CTGGCGGGCA CCACCATCCG CAAGTTTGCC GACAGCCTGT TCGTGCAGTG CGGTATTCAG
ATGCCGCGCC AGCGCCTGGA AACCCTTTCA CTGACCCTGA GCCGCCGTTA CGTGCAGTGC
AGCAATGCGA TCTGGATTGC ACCGCTGGAC GCTGTGTTGC TGGAGTTGAA AGGCGGCACT
CTGGTCGAAC TGGATATGGG AATTCGCGAG CCGGGCGGCT CGGTTGGCCT GTGCAGCAAC
CCGGCCTTGC CACTGACGCG CGCAGCGCAG TGGTGCGTGG ATGAGTTGCG AACCGTCGGT
GCGGCGTACC GGGAAGGGCA GTATGCATAA
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| Protein sequence | MNIDTRIKFR HLVCFLEVAR QGSLARASDA LAISQPALSK SLKELETLLA TTLFVRSKSG
AALTDAGVAF MRFAGPSVQA LRDGVSSLRS GEHETVTARL GVLSTAESLL VPEVVKRLHT
RHPALIVSVM TGPSAYLLSQ LRVGELDLVV GRMTDSPQIQ GLTFEHLYHE SMTLVVRNDH
PLLAAPLKRE SLEQFPLVLP LAGTTIRKFA DSLFVQCGIQ MPRQRLETLS LTLSRRYVQC
SNAIWIAPLD AVLLELKGGT LVELDMGIRE PGGSVGLCSN PALPLTRAAQ WCVDELRTVG
AAYREGQYA
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