Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2330 |
Symbol | |
ID | 1183981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 2585606 |
End bp | 2585998 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637393707 |
Product | response regulator |
Protein accession | NP_792147 |
Protein GI | 28869528 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.26082 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCAAAC ACAGCCTGCG CATCCTGCTG GTGGAGGATC ACCCTTTTCA ACTGATCGCC ACTCAGGTGC TGCTCAACAA TCAGGGCTAC TTCCTGCTGA CTCCCGCACT GACCGCAGCA GAGGCGATGG ACGCCATGCA CCGCAGCCCC GAGCCTTACG GGCTGTTACT GTGCGACCAG TGCCTGCCGG ACATGGCGGG CATCGAACTG ATCAGCGAAG CGGCAAGACA AGGTCTGCTG CGACAGGCCA TCCTGCTCAG CGGCGTACCC GACGCGCAGC TTGAAAGCCT GCAGCAACTG GCGATGGAAC GCGACCTGCC GCTGCTCGGC TGCCTGAGCA AACCCTTGAA CGGCGCCGAC CTTAGCCGCT TGCTGGAAAA CATTCCTGCC TGA
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Protein sequence | MSKHSLRILL VEDHPFQLIA TQVLLNNQGY FLLTPALTAA EAMDAMHRSP EPYGLLLCDQ CLPDMAGIEL ISEAARQGLL RQAILLSGVP DAQLESLQQL AMERDLPLLG CLSKPLNGAD LSRLLENIPA
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