Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2213 |
Symbol | gpsA |
ID | 1183864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2439122 |
End bp | 2440147 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637393594 |
Product | glycerol-3-phosphate dehydrogenase (NAD(P)+) |
Protein accession | NP_792034 |
Protein GI | 28869415 |
COG category | [C] Energy production and conversion |
COG ID | [COG0240] Glycerol-3-phosphate dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACGC AGCAGCCCGT AGCGGTTCTT GGTGGCGGCA GCTTCGGTAC CGCCATTGCA AATCTGCTGG CCGAAAACGG TCATCAGGTT CGTCAGTGGA TGCGCGATCC GGAGCAGGCA GAGGCGATTC GCGTCAATCG CGAAAACCCT CGTTACCTCA AAGGCATCAA GGTGCGCCCT GAGGTCGAGC CGGTAACCGA CCTGACCGCG GCGCTCGAGG TCAGCGAACT GATCTTCGTC GCCTTGCCCT CCAGTGCGCT GCGTTCCGTG CTGTCGCCGC ATATCGAGCG CCTGAGCGGC AAGATGCTGG TGAGCCTGAC CAAAGGTATT GAAGCGCAGA GCTTCAAACT GATGAGTCAG ATTCTTGAAG AAATTGTCCC CCAGGCGCGT ATCGGCGTGT TGTCCGGGCC CAATCTTGCG CGCGAAATAG CCGAGCACGC CCTGACTGCC ACCGTGGTGG CCAGTGAAGA TGAAGACCTG TGTCAGCAGG TTCAGGCTGC CCTGCACGGG CGAACCTTCC GGGTCTATGC CAGCAACGAC CGGTTTGGCG TCGAACTGGG TGGGGCATTG AAGAACGTCT ACGCGATCAT TGCCGGTATG GCCGTGGCGC TGGACATGGG CGAAAACACC AAGAGCATGC TGATTACCCG TGCGCTGGCG GAAATGACCC GTTTTGCTGT GAGTCAGGGC GCCAATCCGA TGACCTTTCT GGGGCTGGCG GGGGTGGGCG ATCTGATCGT GACCTGCTCC TCGCCCAAAA GCCGTAATTA TCAGGTCGGT TTTGCCTTGG GGCAGGGCCT CTCGCTGGAA GAAGCGGTGA CTCGCCTGGG CGAAGTGGCT GAGGGTGTCA ACACCCTCAA GGTGCTCAAG GTCAAGGCGC AGGAGGTTCA GGTCTACATG CCGTTGGTCG CGGGACTGCA TGCGATTCTT TTTGAAGGCC GTACGCTCAG TCAGGTCATC GAGGCGCTGA TGCGTGCCGA GCCGAAGACC GACGTCGATT TTATTTCGAT TACCGGCTTC AATTGA
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Protein sequence | MTTQQPVAVL GGGSFGTAIA NLLAENGHQV RQWMRDPEQA EAIRVNRENP RYLKGIKVRP EVEPVTDLTA ALEVSELIFV ALPSSALRSV LSPHIERLSG KMLVSLTKGI EAQSFKLMSQ ILEEIVPQAR IGVLSGPNLA REIAEHALTA TVVASEDEDL CQQVQAALHG RTFRVYASND RFGVELGGAL KNVYAIIAGM AVALDMGENT KSMLITRALA EMTRFAVSQG ANPMTFLGLA GVGDLIVTCS SPKSRNYQVG FALGQGLSLE EAVTRLGEVA EGVNTLKVLK VKAQEVQVYM PLVAGLHAIL FEGRTLSQVI EALMRAEPKT DVDFISITGF N
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