| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2102 |
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| Symbol | gap-2 |
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| ID | 1183749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2275390 |
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| End bp | 2276838 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637393481 |
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| Product | glyceraldehyde 3-phosphate dehydrogenase, type I |
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| Protein accession | NP_791925 |
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| Protein GI | 28869306 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.871749 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGACTCAGA AGCCCGACCA GTGTCTTGGT GAATGGATTG ATCGTGAAGC ACTCGCCGAA
GCGATGATCC CTCTCATCGG TCAGCTCTAC CGCAATAATA ATGTGGTGAG TTCGATCTAT
GGCCGCAGCC TGATCAACCG TTCAGTCATC GCGATTCTCA AAGCCCACCG CTTTGCGCGT
CACCGTCAGT CCGATGCGGT TGAGTTGTCC GTACATGAAA CGTTCCCGCT TATCAAAGCG
ATGAGCGAGC TCAAACTGGG TGCCGCTTCG GTGGACCTGG GCAAGCTGGC CGTGAAGTTC
AAGACCGAAG GCAATGGCCG CACGCCTGAG CAGTTCGTGC GCGAAGAACT TGCCAGTGTA
GTGGGTCAGC AGAGCACCAG CCGCCGCAAG GGTACTGATG TTGTGCTGTA TGGTTTCGGT
CGTATCGGTC GCCTGCTGGC GCGGATCCTG ATCGAGAAGA CCGGGGGTGG CGAGGGCCTG
CGTCTGCGCG CCATCGTGGT CCGCAAAGGT GCGGAAAACG ACCTGGTCAA GCGTGCCAGC
CTGCTGCGTC GTGACTCGGT GCACGGCCCG TTCGATGGCA CCATCACCAT CGACGAAGCC
AACAGCACCA TCACCGCCAA CGGCAACCTG ATTCAGGTGA TCTACGCCAA GAACCCGACC
GAGGTGGATT ACACCCAGTA CGGTATCAAG GACGCGCTGC TGGTAGACAA CACCGGTGTA
TGGCGTGATG CCGAAGGCCT GGGCCAGCAT CTGGCGTGCC CTGGCATCGA CCGCGTGGTG
TTGACCGCGC CGGGCAAAGG CAAGCTGAAG AACATCGTGC ACGGCATCAA CCACGGTGAA
ATCACCGCCG ACGACAAGAT CGTTTCGGCG GCATCCTGCA CCACCAACGC CATCGTGCCG
GTGCTCAAGG CGGTCAACGA CAAGTTCGGC ATCACCAACG GTCACGTTGA AACGGTTCAC
TCGTACACCA ACGACCAGAA CCTGATCGAC AACTTCCACA AGGGCGATCG CCGTGGCCGC
AGCGCCGCGC TGAACATGGT CATCACCGAG ACCGGTGCAG CGACCGCAGC TGCCAAGGCA
TTGCCTGAGC TGGCCGGCAA GCTGACCGGC AACGCAATCC GCGTTCCGAC GCCGAACGTG
TCCATGGCCA TTCTCAATCT CAACCTCGAG AAGCCGACCA CCCGTGAAGA AATGAACGAG
TACCTGCGCT ACATGGCGCT GCACTCGGAC CTGCACAAGC AGATCGACTT CGTGAACTCG
CAGGAAGTGG TGTCCACCGA CTTCGTCGGC TCGCGTCACG CCGGTGTGGT GGATGCCGAA
GCCACCATCG TCAACGATAA CCGCGTTGTG CTGTACGTCT GGTACGACAA CGAATTCGGT
TACAGCCACC AGGTTGTTCG CGTGATGGAA GACATGGCAG ACGTCAATCC GCCAGCGTTC
CCGCAGTAA
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| Protein sequence | MTQKPDQCLG EWIDREALAE AMIPLIGQLY RNNNVVSSIY GRSLINRSVI AILKAHRFAR
HRQSDAVELS VHETFPLIKA MSELKLGAAS VDLGKLAVKF KTEGNGRTPE QFVREELASV
VGQQSTSRRK GTDVVLYGFG RIGRLLARIL IEKTGGGEGL RLRAIVVRKG AENDLVKRAS
LLRRDSVHGP FDGTITIDEA NSTITANGNL IQVIYAKNPT EVDYTQYGIK DALLVDNTGV
WRDAEGLGQH LACPGIDRVV LTAPGKGKLK NIVHGINHGE ITADDKIVSA ASCTTNAIVP
VLKAVNDKFG ITNGHVETVH SYTNDQNLID NFHKGDRRGR SAALNMVITE TGAATAAAKA
LPELAGKLTG NAIRVPTPNV SMAILNLNLE KPTTREEMNE YLRYMALHSD LHKQIDFVNS
QEVVSTDFVG SRHAGVVDAE ATIVNDNRVV LYVWYDNEFG YSHQVVRVME DMADVNPPAF
PQ
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