Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2080 |
Symbol | |
ID | 1183726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2253746 |
End bp | 2254126 |
Gene Length | 381 bp |
Protein Length | 126 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637393458 |
Product | conserved hypothetical protein, internal deletion |
Protein accession | NP_791903 |
Protein GI | 28869284 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0036018 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGGAT GGAGCACGCC CCCCACAGCA TTCATCGCTC AGATTGAAGG CGATATGACC AAGCAGCTGA GAATCATCGC AATGGCGCTC CTGGGTGAGA TCATCAGTCG CTCCCCGGTG GACACCGGAA GGTTTCGCGG GAACACAACG GTCACGATTG GCTCGCCAGT GTTCTCGAAC AGCCAGACCC TGGACCCGAC CGGAGCTGCC ACGATCAGCA AGGGCGCTTC GGTTCTGGCT GGCCTCAAGC CTTTTTCGAT CATTTACATC CAGAATAATT TGGTTTACGC CGAAAAATTA GAGAACGGCC ATTCCAAGCA AGCCCCCAAT GGAATTTTTG GGCTCGCCTT CGCTGGCGTG GCAGCGGCGT ATGCATCATG A
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Protein sequence | MAGWSTPPTA FIAQIEGDMT KQLRIIAMAL LGEIISRSPV DTGRFRGNTT VTIGSPVFSN SQTLDPTGAA TISKGASVLA GLKPFSIIYI QNNLVYAEKL ENGHSKQAPN GIFGLAFAGV AAAYAS
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