Gene PSPTO_2063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2063 
Symbol 
ID1183708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp2243781 
End bp2244509 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content57% 
IMG OID637393441 
Producthypothetical protein 
Protein accessionNP_791886 
Protein GI28869267 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0518] GMP synthase - Glutamine amidotransferase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0215338 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTTTAC GCATCTGTAT TCTGGAAACC GACAATCTGC GCGCGGAGCT GGTCGAGCAA 
TATCATGGGT ACGGTCGAAT GTTCGAGCGG CTGTTCGCGC GTCAGCCGAT TGCTGCAGAG
TTGTCGGTAT ACAACGTGGT GCAGGGAGTT TATCCACCCG AGGGCGAAAA ATTCGACGCT
TATCTTGTGA CAGGCAGCAA GGCCGATTCG TTTGGCACCG ATCCCTGGAT TCAGACGCTG
AAGGTCTACC TGCTGGAGCT GTACCAGCGC GGCGAGAAGC TGTTGGGTAT CTGCTTTGGC
CACCAGTTGC TGGCTTTGTT GCTGGGCGGC AAGACCGAGC GTGCGGCGCA AGGTTGGGGA
GTCGGCATTC ATCATTACCA GTTGGCCCCG GCCAGACCGT GGATGACCCC GGCTATGGAC
AACCTCACGC TATTGATCAG CCACCAGGAT CAGGTCACCG CGCTGCCTGA GCAGGCAACG
GTTATTGCTT CCAGCGAGTT CTGTCCGTTT GCGGCTTACC ACATCAATGA TCAAGTGCTG
TGCTTTCAGG GCCACCCTGA ATTTATTCAT GACTTTTCAC GGACATTGCT TGATCTTCGC
CAGGAGGCGC TCGGCGAGCA AGTTTACAAA CAGGGTGTCG CCAGCCTCGA TCATGACCAC
CACGGCGCCA CCGTGGCGGA ATGGATGATG CGCTTCGTGG CGCACAAGCC GGACAATCAA
TCAGCCTGA
 
Protein sequence
MPLRICILET DNLRAELVEQ YHGYGRMFER LFARQPIAAE LSVYNVVQGV YPPEGEKFDA 
YLVTGSKADS FGTDPWIQTL KVYLLELYQR GEKLLGICFG HQLLALLLGG KTERAAQGWG
VGIHHYQLAP ARPWMTPAMD NLTLLISHQD QVTALPEQAT VIASSEFCPF AAYHINDQVL
CFQGHPEFIH DFSRTLLDLR QEALGEQVYK QGVASLDHDH HGATVAEWMM RFVAHKPDNQ
SA