Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2063 |
Symbol | |
ID | 1183708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2243781 |
End bp | 2244509 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637393441 |
Product | hypothetical protein |
Protein accession | NP_791886 |
Protein GI | 28869267 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0518] GMP synthase - Glutamine amidotransferase domain |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0215338 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTTTAC GCATCTGTAT TCTGGAAACC GACAATCTGC GCGCGGAGCT GGTCGAGCAA TATCATGGGT ACGGTCGAAT GTTCGAGCGG CTGTTCGCGC GTCAGCCGAT TGCTGCAGAG TTGTCGGTAT ACAACGTGGT GCAGGGAGTT TATCCACCCG AGGGCGAAAA ATTCGACGCT TATCTTGTGA CAGGCAGCAA GGCCGATTCG TTTGGCACCG ATCCCTGGAT TCAGACGCTG AAGGTCTACC TGCTGGAGCT GTACCAGCGC GGCGAGAAGC TGTTGGGTAT CTGCTTTGGC CACCAGTTGC TGGCTTTGTT GCTGGGCGGC AAGACCGAGC GTGCGGCGCA AGGTTGGGGA GTCGGCATTC ATCATTACCA GTTGGCCCCG GCCAGACCGT GGATGACCCC GGCTATGGAC AACCTCACGC TATTGATCAG CCACCAGGAT CAGGTCACCG CGCTGCCTGA GCAGGCAACG GTTATTGCTT CCAGCGAGTT CTGTCCGTTT GCGGCTTACC ACATCAATGA TCAAGTGCTG TGCTTTCAGG GCCACCCTGA ATTTATTCAT GACTTTTCAC GGACATTGCT TGATCTTCGC CAGGAGGCGC TCGGCGAGCA AGTTTACAAA CAGGGTGTCG CCAGCCTCGA TCATGACCAC CACGGCGCCA CCGTGGCGGA ATGGATGATG CGCTTCGTGG CGCACAAGCC GGACAATCAA TCAGCCTGA
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Protein sequence | MPLRICILET DNLRAELVEQ YHGYGRMFER LFARQPIAAE LSVYNVVQGV YPPEGEKFDA YLVTGSKADS FGTDPWIQTL KVYLLELYQR GEKLLGICFG HQLLALLLGG KTERAAQGWG VGIHHYQLAP ARPWMTPAMD NLTLLISHQD QVTALPEQAT VIASSEFCPF AAYHINDQVL CFQGHPEFIH DFSRTLLDLR QEALGEQVYK QGVASLDHDH HGATVAEWMM RFVAHKPDNQ SA
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