Gene PSPTO_2046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2046 
Symbol 
ID1183691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp2229161 
End bp2229706 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content59% 
IMG OID637393424 
ProductARD/ARD' family protein 
Protein accessionNP_791869 
Protein GI28869250 
COG category[S] Function unknown 
COG ID[COG1791] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00213486 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGCC TGTCCGTTTA TCACGTTTCA AGCCCGGATA TTCCCAACAA GGTGCTGACC 
CACCTGGAAG ACATCGCCTC GACGCTGGCC GAACACGGCG TGGCGTTTGA CCGCTGGGAA
GCCGCGACGC CGATCACCCC CGGCGCCAGT CAGGAAGAGG TGATCAACGC CTACCGCACC
CAGATCGACA CGCTGATGAC CCGGCACGGC TACGTCACCG TGGACGTCAT CAGCCTCAAC
AGCGATCACC CGCAGAAAGC CGAACTGCGT GCCAGGTTTC TTGAAGAACA CCGCCACGGC
GAAGACGAAG TGCGCTTTTT CGTCGCCGGG CGCGGTTTGT TCACGCTGCA CATCGACGAT
TACGTGTATG CCGTGCTGTG CGAAAAAAAC GACCTGATTT CCGTACCCGC CGGTACTCGG
CACTGGTTCG ACATGGGCGA AAACCCGCAT TTTGTCGCTA TTCGCCTGTT CAACAACCCT
GACGGCTGGG TCGCAAACTT TACCGGTGAA GACATTGCCG GCCGTTTCCC GCGGCTGGAA
GACTGA
 
Protein sequence
MSSLSVYHVS SPDIPNKVLT HLEDIASTLA EHGVAFDRWE AATPITPGAS QEEVINAYRT 
QIDTLMTRHG YVTVDVISLN SDHPQKAELR ARFLEEHRHG EDEVRFFVAG RGLFTLHIDD
YVYAVLCEKN DLISVPAGTR HWFDMGENPH FVAIRLFNNP DGWVANFTGE DIAGRFPRLE
D