Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2046 |
Symbol | |
ID | 1183691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2229161 |
End bp | 2229706 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637393424 |
Product | ARD/ARD' family protein |
Protein accession | NP_791869 |
Protein GI | 28869250 |
COG category | [S] Function unknown |
COG ID | [COG1791] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00213486 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAGCC TGTCCGTTTA TCACGTTTCA AGCCCGGATA TTCCCAACAA GGTGCTGACC CACCTGGAAG ACATCGCCTC GACGCTGGCC GAACACGGCG TGGCGTTTGA CCGCTGGGAA GCCGCGACGC CGATCACCCC CGGCGCCAGT CAGGAAGAGG TGATCAACGC CTACCGCACC CAGATCGACA CGCTGATGAC CCGGCACGGC TACGTCACCG TGGACGTCAT CAGCCTCAAC AGCGATCACC CGCAGAAAGC CGAACTGCGT GCCAGGTTTC TTGAAGAACA CCGCCACGGC GAAGACGAAG TGCGCTTTTT CGTCGCCGGG CGCGGTTTGT TCACGCTGCA CATCGACGAT TACGTGTATG CCGTGCTGTG CGAAAAAAAC GACCTGATTT CCGTACCCGC CGGTACTCGG CACTGGTTCG ACATGGGCGA AAACCCGCAT TTTGTCGCTA TTCGCCTGTT CAACAACCCT GACGGCTGGG TCGCAAACTT TACCGGTGAA GACATTGCCG GCCGTTTCCC GCGGCTGGAA GACTGA
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Protein sequence | MSSLSVYHVS SPDIPNKVLT HLEDIASTLA EHGVAFDRWE AATPITPGAS QEEVINAYRT QIDTLMTRHG YVTVDVISLN SDHPQKAELR ARFLEEHRHG EDEVRFFVAG RGLFTLHIDD YVYAVLCEKN DLISVPAGTR HWFDMGENPH FVAIRLFNNP DGWVANFTGE DIAGRFPRLE D
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