| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2041 |
|---|
| Symbol | |
|---|
| ID | 1183686 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 2224103 |
|---|
| End bp | 2224906 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637393419 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_791864 |
|---|
| Protein GI | 28869245 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.960389 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGACG CGAATCTCAT GACTGAAACC ATTACAGAAC CCACCAATGC AGAGGCTGAA
GCCCCGGCAA CGCCGCAGCC GTGGGAAGAC GTTCTGCCCG AAAACTTTCA GATGTTGCGT
CTGTCACCAC TGCCCACCGA CCGCGCCACG GGTGGACGCC CTCTGCGCTT CGTGCAGTTC
GGCCGTGCCG AGCGCCACAG CAAGGAAACA AGCCTGCTGC GCATCAACGT CCAGTTGCCC
GGTCAGCGGG TCCGCAAGGA ACAGAACAAC CTGGACGTCT GGGCAGACCA TGAAAAGCGC
ACCGTGCGGT TCGGCCCTGA GTCAGGCTTG CAGATCGAGC CGTGGAACCG CGGCATTGGC
CGTTTCATGA TCGCCCACGC CGTGCATTGG GCGCAGAAGA GATGGTCTTC CTACAAGATC
GAAGGCGTGG CGCTGGCAAG CAAGGACGGT CTGAACGAGG ACACTCGCCT GCGCCGCGAT
CATTTTCTGC GCAGCCTGGG TTTTGAAGTG GCTTACGCCG ACGCGCAGCA CATGAAAGGC
AGCATCAAGG ATGTGCATGT CGGCAACCTG CACAGCACCT GGAACAACGA CAAGGTACAG
ATCATCGAGA TTCTCGAAGC ATCACAGATG CTGGAAAAAG CCGAGAAAAA CATGATTGAG
CAGGAAGTGA CCATTCGCCA GCACGAAGAC CGGGTCAGCA AGTACAAGCG TGAAGACACC
GGCCTGCGCT TCACGATTGC CTGTCTGGTG ACCTTCGCAG TGTTTCAGGC AGGACTGCTG
ATCTGGATCG CGACCCACCG TTAG
|
|---|
| Protein sequence | MTDANLMTET ITEPTNAEAE APATPQPWED VLPENFQMLR LSPLPTDRAT GGRPLRFVQF
GRAERHSKET SLLRINVQLP GQRVRKEQNN LDVWADHEKR TVRFGPESGL QIEPWNRGIG
RFMIAHAVHW AQKRWSSYKI EGVALASKDG LNEDTRLRRD HFLRSLGFEV AYADAQHMKG
SIKDVHVGNL HSTWNNDKVQ IIEILEASQM LEKAEKNMIE QEVTIRQHED RVSKYKREDT
GLRFTIACLV TFAVFQAGLL IWIATHR
|
|---|
| |