| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2033 |
|---|
| Symbol | |
|---|
| ID | 1183678 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 2219277 |
|---|
| End bp | 2219663 |
|---|
| Gene Length | 387 bp |
|---|
| Protein Length | 128 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637393411 |
|---|
| Product | lipoprotein, putative |
|---|
| Protein accession | NP_791856 |
|---|
| Protein GI | 28869237 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3755] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.151249 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTATTT CAATGACCCT TCTGGCTGCG TTCATCGCGC TGGGTATCGG CTGTTCGGCG
CAGGCCGAGA ATTGCGACGC CAATCAGGCG AGCATGAACA CGTGTGCGGC CAACAAACTG
GCAGCGCTGG ATGCCGACCT TAACAAGCAA TACAAGGCGC AGATGGCCTG GCTCCAGACG
CCGGCAAAAA AGCAGGCGCT CAAAGACGCG CAGCAGAAGT GGATAGCCCT GCGTGATGCC
GATTGTCTGT ATCAGGCGGG CAAGCCTGAG GATTCAGGCT CGATCTGGCC TTTGGTGCAG
TCGCAATGCC TGGCCGAGCA AACCAGTGTG CGGCTCAAGC AACTGAAAAG CTATGTGGCC
TGCCGCGATG AAGGTTGCCC GCGCTGA
|
|---|
| Protein sequence | MRISMTLLAA FIALGIGCSA QAENCDANQA SMNTCAANKL AALDADLNKQ YKAQMAWLQT
PAKKQALKDA QQKWIALRDA DCLYQAGKPE DSGSIWPLVQ SQCLAEQTSV RLKQLKSYVA
CRDEGCPR
|
|---|
| |