Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2013 |
Symbol | |
ID | 1183658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 2199398 |
End bp | 2200060 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637393391 |
Product | hypothetical protein |
Protein accession | NP_791836 |
Protein GI | 28869217 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAATT TCACAAGCCC AGCATTGGAG GCACCCTCAG TACCTGTGGC AGAAAGCGAT GGCCTGATCA GAGTTCGCGA TCTTGAATCA GGCATTTCGG TCCATTTCAC CGCACGGGGC TTAATCAAAG AAAAAGACAG CTTTGAGCTT ATGGTTAACG GTGCTGGCTC CGGGGTTACT CAGATCATTT CTGATCCTGA CGCACCTGAA GAGGTGAAGT TCGTTATGAA TCTGCAGCCT GAACACTTCG CTAAAGATGG CACTTATGCA ATCGGGTACC AATGGTTAAC TTTTCCGGGC GATATTCGGA CAGACTCTGC AACTACTGAG ATTCGGATCG ACCGCACCGC CCCAGGCGCG GCGCTGCTGG CTCCTGTCAT TTTCCATCAG ATCAACCTCG GCAACACCCT CACAGGCCTT GTCCCAGGCT ACGCAGACAT GCAGCCCGGA GACCGTATCC GGACCTTCTG CAACGACCGG CAAGGTCCCG CTTACGTGGT CACCTCCGAC AATCTGACTG ATCGTCCGGT ACCGATCATT TTCGACAAGG AGTTTCTGCT GAATCTGCAC AGCGATAGTG TCACGATCAG CTACCGGGTC ATCGATCGTG CGGGCAATAT TTCGCTGCCG GCGCGCTCTG TCACACTCTC GATGCAGGTT TAA
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Protein sequence | MNNFTSPALE APSVPVAESD GLIRVRDLES GISVHFTARG LIKEKDSFEL MVNGAGSGVT QIISDPDAPE EVKFVMNLQP EHFAKDGTYA IGYQWLTFPG DIRTDSATTE IRIDRTAPGA ALLAPVIFHQ INLGNTLTGL VPGYADMQPG DRIRTFCNDR QGPAYVVTSD NLTDRPVPII FDKEFLLNLH SDSVTISYRV IDRAGNISLP ARSVTLSMQV
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